Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm28404-201ENSMUST00000190242 453 ntBASIC1.49□□□□□ -2.17
Scn3aA2ASI5 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC1.49□□□□□ -2.17
Scn3aA2ASI5 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC1.49□□□□□ -2.17
Scn3aA2ASI5 Gm44182-201ENSMUST00000204052 115 ntBASIC1.49□□□□□ -2.17
Scn3aA2ASI5 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Scn3aA2ASI5 Gm45366-201ENSMUST00000209828 384 ntBASIC1.49□□□□□ -2.17
Scn3aA2ASI5 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.49□□□□□ -2.17
Scn3aA2ASI5 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.49□□□□□ -2.17
Scn3aA2ASI5 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.49□□□□□ -2.17
Scn3aA2ASI5 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.49□□□□□ -2.17
Scn3aA2ASI5 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Scn3aA2ASI5 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.49□□□□□ -2.17
Scn3aA2ASI5 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm11556-201ENSMUST00000120751 288 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Lce6a-202ENSMUST00000170676 485 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm20543-201ENSMUST00000174200 726 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm24897-201ENSMUST00000179033 107 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Mir7059-201ENSMUST00000184825 59 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm37869-201ENSMUST00000193385 595 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm43510-201ENSMUST00000197922 353 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm43529-201ENSMUST00000199178 412 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm45071-201ENSMUST00000205353 571 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Mir29c-201ENSMUST00000083614 88 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm22834-201ENSMUST00000102021 79 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm14558-201ENSMUST00000117458 381 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm14362-201ENSMUST00000121679 273 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm15254-201ENSMUST00000149567 273 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm23557-201ENSMUST00000157820 138 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm22483-201ENSMUST00000157986 274 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm24862-201ENSMUST00000179103 79 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm23310-201ENSMUST00000179105 79 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm25461-201ENSMUST00000179293 79 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Mir7063-201ENSMUST00000184158 91 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm44524-201ENSMUST00000203899 271 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
Scn3aA2ASI5 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Gm24150-201ENSMUST00000082759 104 ntBASIC1.48□□□□□ -2.17
Scn3aA2ASI5 Vmn2r-ps83-201ENSMUST00000173787 2368 ntBASIC1.47□□□□□ -2.17
Scn3aA2ASI5 Gm23766-201ENSMUST00000103894 80 ntBASIC1.47□□□□□ -2.17
Scn3aA2ASI5 Gm8858-201ENSMUST00000118259 342 ntBASIC1.47□□□□□ -2.17
Scn3aA2ASI5 Gm14293-201ENSMUST00000118528 577 ntBASIC1.47□□□□□ -2.17
Scn3aA2ASI5 Gm15067-201ENSMUST00000119534 156 ntBASIC1.47□□□□□ -2.17
Scn3aA2ASI5 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.47□□□□□ -2.17
Scn3aA2ASI5 Gm23589-201ENSMUST00000157660 105 ntBASIC1.47□□□□□ -2.17
Scn3aA2ASI5 Mir3098-201ENSMUST00000175416 87 ntBASIC1.47□□□□□ -2.17
Scn3aA2ASI5 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
Scn3aA2ASI5 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Scn3aA2ASI5 Gm44482-201ENSMUST00000199232 103 ntBASIC1.47□□□□□ -2.17
Scn3aA2ASI5 Mir6962-201ENSMUST00000199512 63 ntBASIC1.47□□□□□ -2.17
Scn3aA2ASI5 AC144733.1-201ENSMUST00000222893 1289 ntBASIC1.47□□□□□ -2.17
Scn3aA2ASI5 Gm26108-201ENSMUST00000083973 191 ntBASIC1.47□□□□□ -2.17
Scn3aA2ASI5 Olfr575-201ENSMUST00000084812 957 ntBASIC1.47□□□□□ -2.17
Scn3aA2ASI5 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Scn3aA2ASI5 Gm24907-201ENSMUST00000116932 128 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Gm12225-201ENSMUST00000117995 298 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Gm13720-201ENSMUST00000120741 196 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Gm22328-201ENSMUST00000158074 112 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Mir6370-201ENSMUST00000183510 120 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Gm28597-201ENSMUST00000187664 666 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Gm44794-201ENSMUST00000206550 411 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 AC153141.1-201ENSMUST00000218636 501 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Gm24412-201ENSMUST00000083426 109 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Mir301-201ENSMUST00000083655 86 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Gm13457-201ENSMUST00000117885 267 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Gm7916-201ENSMUST00000120325 456 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Gm22985-201ENSMUST00000122754 116 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Gm23124-201ENSMUST00000157650 107 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Gm24418-201ENSMUST00000177597 79 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Gm24639-201ENSMUST00000178518 79 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Gm23076-201ENSMUST00000179082 79 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Gm25077-201ENSMUST00000179157 79 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Gm28648-201ENSMUST00000190092 343 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Gm24035-201ENSMUST00000082867 107 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Snord38a-201ENSMUST00000083746 71 ntBASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Scn3aA2ASI5 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Scn3aA2ASI5 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
Scn3aA2ASI5 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.45□□□□□ -2.18
Scn3aA2ASI5 Gm22831-201ENSMUST00000102473 109 ntBASIC1.45□□□□□ -2.18
Scn3aA2ASI5 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.45□□□□□ -2.18
Scn3aA2ASI5 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Scn3aA2ASI5 Gm11392-201ENSMUST00000181419 710 ntBASIC1.45□□□□□ -2.18
Scn3aA2ASI5 Gm27511-201ENSMUST00000183502 127 ntBASIC1.45□□□□□ -2.18
Scn3aA2ASI5 Gm27660-201ENSMUST00000184028 208 ntBASIC1.45□□□□□ -2.18
Scn3aA2ASI5 Gm27588-201ENSMUST00000185096 263 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 218.3 ms