Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC0.54□□□□□ -2.32
Trav9-4A0A0B4J1K2 Gm45375-201ENSMUST00000210338 280 ntBASIC0.54□□□□□ -2.32
Trav9-4A0A0B4J1K2 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Trav9-4A0A0B4J1K2 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC0.54□□□□□ -2.32
Trav9-4A0A0B4J1K2 Gm38388-201ENSMUST00000195569 1430 ntBASIC0.54□□□□□ -2.32
Trav9-4A0A0B4J1K2 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 Gm25213-201ENSMUST00000102388 113 ntBASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 Gm14558-201ENSMUST00000117458 381 ntBASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 Gm13356-201ENSMUST00000121678 335 ntBASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 Gm23656-201ENSMUST00000122626 112 ntBASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 Gm3025-201ENSMUST00000163454 489 ntBASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 Gm3111-201ENSMUST00000167426 490 ntBASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 Gm23355-201ENSMUST00000177614 107 ntBASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 Gm24137-201ENSMUST00000180055 79 ntBASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 Gm22391-201ENSMUST00000180356 79 ntBASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 Gm43250-201ENSMUST00000196536 273 ntBASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 Gm45590-201ENSMUST00000209715 262 ntBASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 Gm2628-201ENSMUST00000218019 426 ntBASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 Gm23721-201ENSMUST00000083005 107 ntBASIC0.53□□□□□ -2.32
Trav9-4A0A0B4J1K2 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Defa-ps13-201ENSMUST00000120695 204 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm25325-201ENSMUST00000122559 86 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm22233-201ENSMUST00000157464 114 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm26038-201ENSMUST00000158151 106 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm25868-201ENSMUST00000158253 114 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm23340-201ENSMUST00000158955 123 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Snora24-201ENSMUST00000174989 130 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm24080-201ENSMUST00000175178 232 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm26177-201ENSMUST00000178683 107 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm25312-201ENSMUST00000178972 107 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm43026-201ENSMUST00000202972 325 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm18691-201ENSMUST00000203593 872 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm44910-201ENSMUST00000208451 396 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm44554-201ENSMUST00000208738 147 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 AC156795.1-201ENSMUST00000214655 414 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm18488-201ENSMUST00000215082 364 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm5955-201ENSMUST00000222712 219 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm25403-201ENSMUST00000082971 143 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm24494-201ENSMUST00000083804 81 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Snord35a-201ENSMUST00000083884 90 ntBASIC0.52□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm11572-201ENSMUST00000119164 120 ntBASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm13603-201ENSMUST00000119404 83 ntBASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm14937-201ENSMUST00000119709 208 ntBASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm23206-201ENSMUST00000122720 184 ntBASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm26102-201ENSMUST00000157251 284 ntBASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm23854-201ENSMUST00000158378 108 ntBASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm25901-201ENSMUST00000158494 130 ntBASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm23196-201ENSMUST00000158806 107 ntBASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm28409-201ENSMUST00000187064 103 ntBASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm38044-201ENSMUST00000192964 487 ntBASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm44830-201ENSMUST00000207667 584 ntBASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm21089-201ENSMUST00000215843 325 ntBASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm25038-201ENSMUST00000082928 130 ntBASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm23104-201ENSMUST00000083722 104 ntBASIC0.51□□□□□ -2.33
Trav9-4A0A0B4J1K2 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm23015-201ENSMUST00000104145 128 ntBASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 Snord71-201ENSMUST00000104361 85 ntBASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm12449-201ENSMUST00000117572 234 ntBASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm23277-201ENSMUST00000157914 136 ntBASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm25981-201ENSMUST00000157921 295 ntBASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm24808-201ENSMUST00000157993 118 ntBASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm24221-201ENSMUST00000158833 313 ntBASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 Mir3109-201ENSMUST00000175301 88 ntBASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm25120-201ENSMUST00000180148 79 ntBASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm29613-201ENSMUST00000185846 313 ntBASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm29600-201ENSMUST00000188687 377 ntBASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm29544-201ENSMUST00000188860 313 ntBASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm28808-201ENSMUST00000190978 313 ntBASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 AC140477.1-201ENSMUST00000222354 246 ntBASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm25128-201ENSMUST00000083339 76 ntBASIC0.5□□□□□ -2.33
Trav9-4A0A0B4J1K2 Gm24254-201ENSMUST00000083702 104 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms