Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Mir6388-201ENSMUST00000184417 75 ntBASIC1.17□□□□□ -2.22
Trav11A0A0B4J1J9 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Trav11A0A0B4J1J9 Gm36891-201ENSMUST00000191995 655 ntBASIC1.17□□□□□ -2.22
Trav11A0A0B4J1J9 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC1.17□□□□□ -2.22
Trav11A0A0B4J1J9 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.17□□□□□ -2.22
Trav11A0A0B4J1J9 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Trav11A0A0B4J1J9 Gm23093-201ENSMUST00000083450 102 ntBASIC1.17□□□□□ -2.22
Trav11A0A0B4J1J9 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Trav11A0A0B4J1J9 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Trav11A0A0B4J1J9 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm25421-201ENSMUST00000104218 164 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm25876-201ENSMUST00000104329 119 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm24851-201ENSMUST00000158028 103 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm24358-201ENSMUST00000158424 288 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm22666-201ENSMUST00000158717 164 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm24677-201ENSMUST00000158755 150 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm23548-201ENSMUST00000158963 106 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Mir3057-201ENSMUST00000175040 91 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm24418-201ENSMUST00000177597 79 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm24639-201ENSMUST00000178518 79 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm23076-201ENSMUST00000179082 79 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm25077-201ENSMUST00000179157 79 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Mir6351-201ENSMUST00000183826 99 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Mir7081-201ENSMUST00000184490 75 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm29603-201ENSMUST00000186792 334 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm28151-201ENSMUST00000189404 951 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm37641-201ENSMUST00000193837 239 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm42570-201ENSMUST00000195937 292 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm18546-201ENSMUST00000197245 676 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm44655-201ENSMUST00000207768 423 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm25475-201ENSMUST00000082825 180 ntBASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Trav11A0A0B4J1J9 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Trav11A0A0B4J1J9 Mir653-201ENSMUST00000102402 85 ntBASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 Gm23551-201ENSMUST00000116852 121 ntBASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 Gm15861-201ENSMUST00000120979 339 ntBASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 Gm15536-201ENSMUST00000121411 114 ntBASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 Gm22891-201ENSMUST00000158641 164 ntBASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 Gm20438-201ENSMUST00000174441 329 ntBASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 Gm23090-201ENSMUST00000177331 78 ntBASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 Mir496b-201ENSMUST00000184935 113 ntBASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 Gm16976-205ENSMUST00000227324 226 ntBASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 Gm24406-201ENSMUST00000083026 128 ntBASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Trav11A0A0B4J1J9 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Gm25068-201ENSMUST00000103895 110 ntBASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Gm22713-201ENSMUST00000116895 130 ntBASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Gm23170-201ENSMUST00000157158 106 ntBASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Gm22793-201ENSMUST00000157227 330 ntBASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Gm22510-201ENSMUST00000179304 79 ntBASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Gm26336-201ENSMUST00000179449 79 ntBASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Gm26390-201ENSMUST00000179628 79 ntBASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Gm27660-201ENSMUST00000184028 208 ntBASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Mir6419-201ENSMUST00000184784 113 ntBASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Gm37599-201ENSMUST00000193067 489 ntBASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Gm43556-201ENSMUST00000196186 681 ntBASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Gm35212-201ENSMUST00000196672 606 ntBASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Mir691-201ENSMUST00000199719 78 ntBASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Gm44962-201ENSMUST00000206460 279 ntBASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Trav11A0A0B4J1J9 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
Trav11A0A0B4J1J9 Gm14972-201ENSMUST00000121780 364 ntBASIC1.13□□□□□ -2.23
Trav11A0A0B4J1J9 Gm25279-201ENSMUST00000122608 133 ntBASIC1.13□□□□□ -2.23
Trav11A0A0B4J1J9 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Trav11A0A0B4J1J9 Gm23120-201ENSMUST00000157654 287 ntBASIC1.13□□□□□ -2.23
Trav11A0A0B4J1J9 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.13□□□□□ -2.23
Trav11A0A0B4J1J9 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Trav11A0A0B4J1J9 Gm27517-201ENSMUST00000184347 236 ntBASIC1.13□□□□□ -2.23
Trav11A0A0B4J1J9 Gm27959-201ENSMUST00000185172 111 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms