Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.57□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm27898-201ENSMUST00000183987 80 ntBASIC0.57□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm29005-201ENSMUST00000186773 320 ntBASIC0.57□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm37946-201ENSMUST00000192064 347 ntBASIC0.57□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.57□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm38041-201ENSMUST00000194445 661 ntBASIC0.57□□□□□ -2.32
Trbv16A0A0B4J1H3 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC0.57□□□□□ -2.32
Trbv16A0A0B4J1H3 AC123656.2-201ENSMUST00000226726 227 ntBASIC0.57□□□□□ -2.32
Trbv16A0A0B4J1H3 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.57□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm26224-201ENSMUST00000082506 80 ntBASIC0.57□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm23104-201ENSMUST00000083722 104 ntBASIC0.57□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm23102-201ENSMUST00000083724 116 ntBASIC0.57□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm24282-201ENSMUST00000104232 66 ntBASIC0.56□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm24896-201ENSMUST00000122741 135 ntBASIC0.56□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm17052-201ENSMUST00000165496 289 ntBASIC0.56□□□□□ -2.32
Trbv16A0A0B4J1H3 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.56□□□□□ -2.32
Trbv16A0A0B4J1H3 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC0.56□□□□□ -2.32
Trbv16A0A0B4J1H3 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC0.56□□□□□ -2.32
Trbv16A0A0B4J1H3 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC0.56□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm21089-201ENSMUST00000215843 325 ntBASIC0.56□□□□□ -2.32
Trbv16A0A0B4J1H3 AC120540.1-201ENSMUST00000221879 324 ntBASIC0.56□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.56□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm25938-201ENSMUST00000104139 166 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm14359-201ENSMUST00000118883 424 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm25544-201ENSMUST00000122676 120 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm25294-201ENSMUST00000122791 104 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm15274-201ENSMUST00000131442 291 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm21979-201ENSMUST00000139887 291 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm9498-201ENSMUST00000140849 291 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm14368-201ENSMUST00000145305 415 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm15259-201ENSMUST00000151262 291 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm22551-201ENSMUST00000157795 103 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm24942-201ENSMUST00000158328 114 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm20438-201ENSMUST00000174441 329 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Mir3964-201ENSMUST00000174898 74 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm20613-201ENSMUST00000175828 345 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm21815-201ENSMUST00000178213 664 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm26652-202ENSMUST00000181672 475 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm37599-201ENSMUST00000193067 489 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm37319-201ENSMUST00000193500 636 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm42834-201ENSMUST00000196845 256 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm2829-201ENSMUST00000213121 499 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm10264-201ENSMUST00000220589 429 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 AC159203.2-201ENSMUST00000221326 193 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 AC154692.1-201ENSMUST00000228314 544 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm23462-201ENSMUST00000083264 104 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Mir27b-201ENSMUST00000083541 73 ntBASIC0.55□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm15177-201ENSMUST00000120491 577 ntBASIC0.54□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.54□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm23230-201ENSMUST00000157298 133 ntBASIC0.54□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm20630-201ENSMUST00000177387 551 ntBASIC0.54□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm23648-201ENSMUST00000180301 107 ntBASIC0.54□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC0.54□□□□□ -2.32
Trbv16A0A0B4J1H3 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC0.54□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm23506-201ENSMUST00000083077 107 ntBASIC0.54□□□□□ -2.32
Trbv16A0A0B4J1H3 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
Trbv16A0A0B4J1H3 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.53□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.53□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.53□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.53□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.53□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.53□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.53□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.53□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
Trbv16A0A0B4J1H3 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC0.53□□□□□ -2.32
Trbv16A0A0B4J1H3 Mir3569-201ENSMUST00000185080 58 ntBASIC0.53□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm9156-201ENSMUST00000189660 463 ntBASIC0.53□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm44125-201ENSMUST00000203068 448 ntBASIC0.53□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm45590-201ENSMUST00000209715 262 ntBASIC0.53□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm17990-201ENSMUST00000211728 553 ntBASIC0.53□□□□□ -2.32
Trbv16A0A0B4J1H3 AC113305.1-201ENSMUST00000214664 724 ntBASIC0.53□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm26263-201ENSMUST00000083281 164 ntBASIC0.53□□□□□ -2.32
Trbv16A0A0B4J1H3 Gm37630-201ENSMUST00000194210 1456 ntBASIC0.53□□□□□ -2.33
Trbv16A0A0B4J1H3 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.52□□□□□ -2.33
Trbv16A0A0B4J1H3 Gm12016-201ENSMUST00000119079 681 ntBASIC0.52□□□□□ -2.33
Trbv16A0A0B4J1H3 Gm22038-201ENSMUST00000157277 242 ntBASIC0.52□□□□□ -2.33
Trbv16A0A0B4J1H3 Gm25059-201ENSMUST00000157367 117 ntBASIC0.52□□□□□ -2.33
Trbv16A0A0B4J1H3 Gm23277-201ENSMUST00000157914 136 ntBASIC0.52□□□□□ -2.33
Trbv16A0A0B4J1H3 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC0.52□□□□□ -2.33
Trbv16A0A0B4J1H3 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.52□□□□□ -2.33
Trbv16A0A0B4J1H3 Gm22929-201ENSMUST00000175517 107 ntBASIC0.52□□□□□ -2.33
Trbv16A0A0B4J1H3 Gm23419-201ENSMUST00000175523 84 ntBASIC0.52□□□□□ -2.33
Trbv16A0A0B4J1H3 Gm28560-201ENSMUST00000186091 315 ntBASIC0.52□□□□□ -2.33
Trbv16A0A0B4J1H3 Gm28334-201ENSMUST00000186653 315 ntBASIC0.52□□□□□ -2.33
Trbv16A0A0B4J1H3 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC0.52□□□□□ -2.33
Trbv16A0A0B4J1H3 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.52□□□□□ -2.33
Trbv16A0A0B4J1H3 Gm28495-201ENSMUST00000188452 315 ntBASIC0.52□□□□□ -2.33
Trbv16A0A0B4J1H3 Gm28232-201ENSMUST00000188683 315 ntBASIC0.52□□□□□ -2.33
Trbv16A0A0B4J1H3 Gm28481-201ENSMUST00000189231 315 ntBASIC0.52□□□□□ -2.33
Trbv16A0A0B4J1H3 Gm29059-201ENSMUST00000191534 315 ntBASIC0.52□□□□□ -2.33
Trbv16A0A0B4J1H3 Trbv22-201ENSMUST00000191697 291 ntBASIC0.52□□□□□ -2.33
Trbv16A0A0B4J1H3 Gm37765-201ENSMUST00000192395 315 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms