Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm24412-201ENSMUST00000083426 109 ntBASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm26175-201ENSMUST00000083794 131 ntBASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.35□□□□□ -2.19
Trbv1A0A0B4J1G7 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm15365-201ENSMUST00000122392 300 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm26278-201ENSMUST00000157098 132 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm24481-201ENSMUST00000157210 102 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm19932-201ENSMUST00000177033 313 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm25933-201ENSMUST00000178943 108 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm27265-201ENSMUST00000183559 77 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm27248-201ENSMUST00000184004 166 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm27919-201ENSMUST00000185163 107 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm29134-201ENSMUST00000186579 126 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm18185-201ENSMUST00000186725 667 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm29350-201ENSMUST00000189141 541 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm28337-201ENSMUST00000190425 666 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm37923-201ENSMUST00000191624 161 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm31123-201ENSMUST00000192094 666 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Snord43-201ENSMUST00000199549 108 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm42807-201ENSMUST00000200141 329 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm25475-201ENSMUST00000082825 180 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm23453-201ENSMUST00000083326 106 ntBASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
Trbv1A0A0B4J1G7 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm22834-201ENSMUST00000102021 79 ntBASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 Mir743b-201ENSMUST00000104751 77 ntBASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm17132-201ENSMUST00000109542 1158 ntBASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm14823-201ENSMUST00000117698 238 ntBASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm24333-201ENSMUST00000175101 84 ntBASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm23379-201ENSMUST00000180026 107 ntBASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm27013-201ENSMUST00000182441 1024 ntBASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 Mir6997-201ENSMUST00000184313 71 ntBASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm44482-201ENSMUST00000199232 103 ntBASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm18854-201ENSMUST00000211196 329 ntBASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm24035-201ENSMUST00000082867 107 ntBASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 Mir151-201ENSMUST00000083678 68 ntBASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm26108-201ENSMUST00000083973 191 ntBASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.33□□□□□ -2.2
Trbv1A0A0B4J1G7 Mir873a-201ENSMUST00000104863 77 ntBASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm14624-201ENSMUST00000117746 192 ntBASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm11991-201ENSMUST00000119652 1074 ntBASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm25052-201ENSMUST00000122661 158 ntBASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm22338-201ENSMUST00000157715 129 ntBASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm24858-201ENSMUST00000158058 323 ntBASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm7592-201ENSMUST00000160674 627 ntBASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm25994-201ENSMUST00000175392 101 ntBASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Mir7226-201ENSMUST00000184953 60 ntBASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Ighv1-46-201ENSMUST00000193988 351 ntBASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm43578-201ENSMUST00000201250 459 ntBASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm44446-201ENSMUST00000204864 255 ntBASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm44128-201ENSMUST00000204909 219 ntBASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm44564-201ENSMUST00000207985 180 ntBASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm44114-201ENSMUST00000203270 2727 ntBASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm13153-201ENSMUST00000120969 637 ntBASIC1.31□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm23718-201ENSMUST00000157350 307 ntBASIC1.31□□□□□ -2.2
Trbv1A0A0B4J1G7 Mir1949-201ENSMUST00000157434 141 ntBASIC1.31□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm23589-201ENSMUST00000157660 105 ntBASIC1.31□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm22891-201ENSMUST00000158641 164 ntBASIC1.31□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.31□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm21827-201ENSMUST00000178247 423 ntBASIC1.31□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm18775-201ENSMUST00000190763 586 ntBASIC1.31□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm42570-201ENSMUST00000195937 292 ntBASIC1.31□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm44666-201ENSMUST00000208544 391 ntBASIC1.31□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm45365-201ENSMUST00000209489 256 ntBASIC1.31□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm2829-201ENSMUST00000213121 499 ntBASIC1.31□□□□□ -2.2
Trbv1A0A0B4J1G7 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Trbv1A0A0B4J1G7 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.31□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm26457-201ENSMUST00000082678 78 ntBASIC1.31□□□□□ -2.2
Trbv1A0A0B4J1G7 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.31□□□□□ -2.2
Trbv1A0A0B4J1G7 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms