Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Mir7068-201ENSMUST00000183439 74 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm28110-201ENSMUST00000185782 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm29057-201ENSMUST00000186468 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm28737-201ENSMUST00000186808 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm29147-201ENSMUST00000186846 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm29118-201ENSMUST00000186908 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm28433-201ENSMUST00000187085 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm29227-201ENSMUST00000187139 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm28759-201ENSMUST00000187621 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm28831-201ENSMUST00000187739 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm28200-201ENSMUST00000187778 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm29034-201ENSMUST00000188099 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm28752-201ENSMUST00000188340 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm28474-201ENSMUST00000188501 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm29378-201ENSMUST00000188723 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm28569-201ENSMUST00000188748 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm28120-201ENSMUST00000188812 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm28369-201ENSMUST00000188993 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm28537-201ENSMUST00000189026 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm28909-201ENSMUST00000189406 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm28861-201ENSMUST00000189681 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm28717-201ENSMUST00000189950 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm29180-201ENSMUST00000190003 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm29575-201ENSMUST00000190597 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm29631-201ENSMUST00000191065 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm28160-201ENSMUST00000191229 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm29469-201ENSMUST00000191448 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm37658-201ENSMUST00000192672 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm38044-201ENSMUST00000192964 487 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm37129-201ENSMUST00000195791 315 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm10297-201ENSMUST00000207136 651 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 AC159203.2-201ENSMUST00000221326 193 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm46994-201ENSMUST00000221523 219 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm5955-201ENSMUST00000222712 219 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 AC154692.1-201ENSMUST00000228314 544 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 AC124426.1-203ENSMUST00000221814 1362 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Gm19428-201ENSMUST00000220512 1995 ntBASIC0.43□□□□□ -2.34
Trav3-4A0A075B654 Mir883a-201ENSMUST00000104824 76 ntBASIC0.42□□□□□ -2.34
Trav3-4A0A075B654 Gm16412-201ENSMUST00000121602 273 ntBASIC0.42□□□□□ -2.34
Trav3-4A0A075B654 Gm13409-201ENSMUST00000122072 546 ntBASIC0.42□□□□□ -2.34
Trav3-4A0A075B654 Gm25371-201ENSMUST00000158162 101 ntBASIC0.42□□□□□ -2.34
Trav3-4A0A075B654 Gm26405-201ENSMUST00000158495 100 ntBASIC0.42□□□□□ -2.34
Trav3-4A0A075B654 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.42□□□□□ -2.34
Trav3-4A0A075B654 Mir344d-3-201ENSMUST00000175458 80 ntBASIC0.42□□□□□ -2.34
Trav3-4A0A075B654 Gm29600-201ENSMUST00000188687 377 ntBASIC0.42□□□□□ -2.34
Trav3-4A0A075B654 Gm19123-201ENSMUST00000190716 651 ntBASIC0.42□□□□□ -2.34
Trav3-4A0A075B654 Gm44326-201ENSMUST00000198226 101 ntBASIC0.42□□□□□ -2.34
Trav3-4A0A075B654 Gm42976-201ENSMUST00000200313 222 ntBASIC0.42□□□□□ -2.34
Trav3-4A0A075B654 Gm18488-201ENSMUST00000215082 364 ntBASIC0.42□□□□□ -2.34
Trav3-4A0A075B654 AC112274.2-201ENSMUST00000218436 170 ntBASIC0.42□□□□□ -2.34
Trav3-4A0A075B654 Gm18188-201ENSMUST00000219386 478 ntBASIC0.42□□□□□ -2.34
Trav3-4A0A075B654 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC0.42□□□□□ -2.34
Trav3-4A0A075B654 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.42□□□□□ -2.34
Trav3-4A0A075B654 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC0.42□□□□□ -2.34
Trav3-4A0A075B654 Snord118-201ENSMUST00000082965 135 ntBASIC0.42□□□□□ -2.34
Trav3-4A0A075B654 Gm23733-201ENSMUST00000083750 106 ntBASIC0.42□□□□□ -2.34
Trav3-4A0A075B654 Gm22750-201ENSMUST00000102076 103 ntBASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 Gm25059-201ENSMUST00000157367 117 ntBASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 Gm22515-201ENSMUST00000158273 305 ntBASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 Gm24668-201ENSMUST00000158935 104 ntBASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 Mir3092-201ENSMUST00000174954 96 ntBASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 Gm23636-201ENSMUST00000175070 95 ntBASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 Gm37081-201ENSMUST00000192034 196 ntBASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 Gm37399-201ENSMUST00000195224 416 ntBASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 Gm45912-201ENSMUST00000210646 543 ntBASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 Gm17990-201ENSMUST00000211728 553 ntBASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 Gm23462-201ENSMUST00000083264 104 ntBASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 Snord7-201ENSMUST00000083781 97 ntBASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 Gm18360-201ENSMUST00000173327 1524 ntBASIC0.41□□□□□ -2.34
Trav3-4A0A075B654 AC125532.1-201ENSMUST00000216210 2334 ntBASIC0.4□□□□□ -2.35
Trav3-4A0A075B654 Gm23010-201ENSMUST00000104151 126 ntBASIC0.4□□□□□ -2.35
Trav3-4A0A075B654 Gm24068-201ENSMUST00000104513 132 ntBASIC0.4□□□□□ -2.35
Trav3-4A0A075B654 Gm27676-201ENSMUST00000183669 61 ntBASIC0.4□□□□□ -2.35
Trav3-4A0A075B654 Gm29490-201ENSMUST00000190923 342 ntBASIC0.4□□□□□ -2.35
Trav3-4A0A075B654 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC0.4□□□□□ -2.35
Trav3-4A0A075B654 Igkv4-65-201ENSMUST00000196986 358 ntBASIC0.4□□□□□ -2.35
Trav3-4A0A075B654 AC139186.1-201ENSMUST00000197610 94 ntBASIC0.4□□□□□ -2.35
Trav3-4A0A075B654 Trav15d-3-201ENSMUST00000198604 167 ntBASIC0.4□□□□□ -2.35
Trav3-4A0A075B654 Gm44320-201ENSMUST00000199276 86 ntBASIC0.4□□□□□ -2.35
Trav3-4A0A075B654 Trav15n-3-201ENSMUST00000200498 168 ntBASIC0.4□□□□□ -2.35
Trav3-4A0A075B654 AC127371.3-201ENSMUST00000228129 415 ntBASIC0.4□□□□□ -2.35
Trav3-4A0A075B654 Gm25403-201ENSMUST00000082971 143 ntBASIC0.4□□□□□ -2.35
Trav3-4A0A075B654 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
Trav3-4A0A075B654 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.4□□□□□ -2.35
Trav3-4A0A075B654 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Mir343-201ENSMUST00000102360 75 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm23203-201ENSMUST00000104374 107 ntBASIC0.39□□□□□ -2.35
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms