Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm12765-201ENSMUST00000117273 615 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Gm13806-201ENSMUST00000117822 325 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Gm15844-201ENSMUST00000118016 576 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Gm13085-201ENSMUST00000118356 171 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Gm13339-201ENSMUST00000120651 510 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Gm12155-201ENSMUST00000121267 160 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Gm24010-201ENSMUST00000157731 282 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Gm24237-201ENSMUST00000157790 132 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Gm22159-201ENSMUST00000158412 130 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Gm25486-201ENSMUST00000158726 63 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Gm24757-201ENSMUST00000176987 371 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Gm24862-201ENSMUST00000179103 79 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Gm23310-201ENSMUST00000179105 79 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Gm25461-201ENSMUST00000179293 79 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Gm28740-201ENSMUST00000186142 215 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Gm44446-201ENSMUST00000204864 255 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.12□□□□□ -2.07
H2afb2S4R1M3 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.12□□□□□ -2.07
H2afb2S4R1M3 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 AC165106.2-201ENSMUST00000226749 97 ntBASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.12□□□□□ -2.07
H2afb2S4R1M3 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Gm25529-201ENSMUST00000104850 92 ntBASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Gm14624-201ENSMUST00000117746 192 ntBASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Gm14551-201ENSMUST00000120802 256 ntBASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Gm12876-201ENSMUST00000120975 408 ntBASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Gm12071-201ENSMUST00000121968 469 ntBASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Gm23867-201ENSMUST00000122649 274 ntBASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Gm23752-201ENSMUST00000157584 115 ntBASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Gm17062-201ENSMUST00000166987 461 ntBASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Gm5224-201ENSMUST00000183060 350 ntBASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Gm27582-201ENSMUST00000184084 126 ntBASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Gm27399-201ENSMUST00000184250 78 ntBASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Mir195b-201ENSMUST00000184814 97 ntBASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Gm43624-201ENSMUST00000197368 180 ntBASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.11□□□□□ -2.07
H2afb2S4R1M3 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.11□□□□□ -2.07
H2afb2S4R1M3 CT485612.2-201ENSMUST00000223014 151 ntBASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Mir124a-3-201ENSMUST00000083520 68 ntBASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
H2afb2S4R1M3 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Olfr659-202ENSMUST00000214986 4842 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
H2afb2S4R1M3 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Olfr857-202ENSMUST00000212013 2306 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Gm14602-201ENSMUST00000118625 340 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Gm14940-201ENSMUST00000119309 495 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Gm14843-201ENSMUST00000119596 212 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Gm12956-201ENSMUST00000122184 414 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Gm2830-201ENSMUST00000140330 385 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Gm16218-201ENSMUST00000155424 388 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Gm25827-201ENSMUST00000157089 107 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Gm24908-201ENSMUST00000157294 127 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Gm24716-201ENSMUST00000157524 104 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Mir5099-201ENSMUST00000175257 74 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Gm23660-201ENSMUST00000178362 79 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Gm22131-201ENSMUST00000178415 94 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Gm24088-201ENSMUST00000179100 79 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Trbv18-201ENSMUST00000194256 294 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Gm44811-201ENSMUST00000209120 228 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC2.1□□□□□ -2.07
H2afb2S4R1M3 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Gm23723-201ENSMUST00000082996 132 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Snora69-201ENSMUST00000083708 131 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.1□□□□□ -2.07
H2afb2S4R1M3 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
H2afb2S4R1M3 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.09□□□□□ -2.07
H2afb2S4R1M3 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.09□□□□□ -2.07
H2afb2S4R1M3 Mir759-201ENSMUST00000103254 98 ntBASIC2.09□□□□□ -2.07
H2afb2S4R1M3 Gm24068-201ENSMUST00000104513 132 ntBASIC2.09□□□□□ -2.07
H2afb2S4R1M3 Gm16242-201ENSMUST00000117741 334 ntBASIC2.09□□□□□ -2.07
H2afb2S4R1M3 Gm13457-201ENSMUST00000117885 267 ntBASIC2.09□□□□□ -2.07
H2afb2S4R1M3 Gm14269-201ENSMUST00000120455 306 ntBASIC2.09□□□□□ -2.07
H2afb2S4R1M3 Gm23588-201ENSMUST00000157659 99 ntBASIC2.09□□□□□ -2.07
H2afb2S4R1M3 Gm23641-201ENSMUST00000157857 101 ntBASIC2.09□□□□□ -2.07
H2afb2S4R1M3 Gm23024-201ENSMUST00000158770 292 ntBASIC2.09□□□□□ -2.07
H2afb2S4R1M3 Gm7953-201ENSMUST00000168278 469 ntBASIC2.09□□□□□ -2.07
H2afb2S4R1M3 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC2.09□□□□□ -2.07
H2afb2S4R1M3 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC2.09□□□□□ -2.07
H2afb2S4R1M3 Gm28661-201ENSMUST00000188231 681 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 135.1 ms