Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Mir7232-201ENSMUST00000197929 74 ntBASIC2.24□□□□□ -2.05
H2afb1S4R1E0 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC2.24□□□□□ -2.05
H2afb1S4R1E0 Gm44966-201ENSMUST00000208096 157 ntBASIC2.24□□□□□ -2.05
H2afb1S4R1E0 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
H2afb1S4R1E0 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.24□□□□□ -2.05
H2afb1S4R1E0 AC125311.1-201ENSMUST00000226950 220 ntBASIC2.24□□□□□ -2.05
H2afb1S4R1E0 Gm10025-201ENSMUST00000079568 372 ntBASIC2.24□□□□□ -2.05
H2afb1S4R1E0 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
H2afb1S4R1E0 Gm25079-201ENSMUST00000082529 203 ntBASIC2.24□□□□□ -2.05
H2afb1S4R1E0 Gm23721-201ENSMUST00000083005 107 ntBASIC2.24□□□□□ -2.05
H2afb1S4R1E0 Gm23727-201ENSMUST00000083352 164 ntBASIC2.24□□□□□ -2.05
H2afb1S4R1E0 Gm23247-201ENSMUST00000083373 107 ntBASIC2.24□□□□□ -2.05
H2afb1S4R1E0 Gm22154-201ENSMUST00000083844 131 ntBASIC2.24□□□□□ -2.05
H2afb1S4R1E0 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
H2afb1S4R1E0 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
H2afb1S4R1E0 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.24□□□□□ -2.05
H2afb1S4R1E0 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
H2afb1S4R1E0 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
H2afb1S4R1E0 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
H2afb1S4R1E0 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Gm23668-201ENSMUST00000157465 111 ntBASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Gm22328-201ENSMUST00000158074 112 ntBASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Gm22389-201ENSMUST00000158193 301 ntBASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Gm7837-201ENSMUST00000190873 412 ntBASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Gm37923-201ENSMUST00000191624 161 ntBASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Gm37037-201ENSMUST00000194475 424 ntBASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Gm45119-201ENSMUST00000207612 199 ntBASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Gm45315-201ENSMUST00000209283 333 ntBASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Gm18000-201ENSMUST00000212153 800 ntBASIC2.23□□□□□ -2.05
H2afb1S4R1E0 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.23□□□□□ -2.05
H2afb1S4R1E0 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.23□□□□□ -2.05
H2afb1S4R1E0 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Snord42a-201ENSMUST00000082606 65 ntBASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Gm26457-201ENSMUST00000082678 78 ntBASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Gm22443-201ENSMUST00000082890 107 ntBASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
H2afb1S4R1E0 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Gm26500-201ENSMUST00000101867 106 ntBASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Gm24172-201ENSMUST00000104127 117 ntBASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Gm11798-201ENSMUST00000119150 421 ntBASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Gm13396-201ENSMUST00000120617 271 ntBASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Gm20462-201ENSMUST00000172623 408 ntBASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Gm21978-201ENSMUST00000179696 377 ntBASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Mir7667-201ENSMUST00000183866 63 ntBASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Gm27640-201ENSMUST00000184580 147 ntBASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Gm28579-201ENSMUST00000186143 369 ntBASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Gm28418-201ENSMUST00000186179 423 ntBASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Gm28825-201ENSMUST00000186233 238 ntBASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Gm37557-201ENSMUST00000191640 139 ntBASIC2.22□□□□□ -2.05
H2afb1S4R1E0 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Gm44468-201ENSMUST00000199516 105 ntBASIC2.22□□□□□ -2.05
H2afb1S4R1E0 AC102369.1-201ENSMUST00000218415 373 ntBASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Gm22866-201ENSMUST00000083947 177 ntBASIC2.22□□□□□ -2.05
H2afb1S4R1E0 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.22□□□□□ -2.05
H2afb1S4R1E0 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
H2afb1S4R1E0 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Gm24403-201ENSMUST00000104616 130 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Gm22151-201ENSMUST00000116963 58 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Gm6956-201ENSMUST00000134724 546 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Gm23557-201ENSMUST00000157820 138 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Gm25224-201ENSMUST00000158195 68 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Gm24771-201ENSMUST00000158508 137 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Mir1927-201ENSMUST00000158579 109 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Gm25162-201ENSMUST00000158906 159 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Gm24085-201ENSMUST00000175172 116 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Mir3965-201ENSMUST00000175570 69 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Gm23933-201ENSMUST00000178405 79 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Gm6660-201ENSMUST00000179149 468 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Gm27905-201ENSMUST00000184005 207 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Mir7658-201ENSMUST00000184043 57 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Gm43510-201ENSMUST00000197922 353 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.21□□□□□ -2.06
H2afb1S4R1E0 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
H2afb1S4R1E0 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Gm5023-201ENSMUST00000217442 587 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Mir496a-201ENSMUST00000093627 79 ntBASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
H2afb1S4R1E0 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms