Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm22565-201ENSMUST00000175540 69 ntBASIC0.88□□□□□ -2.27
Scn8aQ9WTU3 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Scn8aQ9WTU3 Gm25194-201ENSMUST00000177987 79 ntBASIC0.88□□□□□ -2.27
Scn8aQ9WTU3 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC0.88□□□□□ -2.27
Scn8aQ9WTU3 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.88□□□□□ -2.27
Scn8aQ9WTU3 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC0.88□□□□□ -2.27
Scn8aQ9WTU3 AC120540.1-201ENSMUST00000221879 324 ntBASIC0.88□□□□□ -2.27
Scn8aQ9WTU3 Gm23104-201ENSMUST00000083722 104 ntBASIC0.88□□□□□ -2.27
Scn8aQ9WTU3 Gm15659-201ENSMUST00000118881 341 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Gm14898-201ENSMUST00000120202 645 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Gm2768-201ENSMUST00000121062 250 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Gm22082-201ENSMUST00000157587 161 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Gm24080-201ENSMUST00000175178 232 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Gm18397-201ENSMUST00000176704 587 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Gm27964-201ENSMUST00000185195 62 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Gm37029-201ENSMUST00000195773 239 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Gm44564-201ENSMUST00000207985 180 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 AC122225.1-201ENSMUST00000215641 369 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Gm22299-201ENSMUST00000082663 136 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Gm23517-201ENSMUST00000082830 192 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Gm12656-201ENSMUST00000118149 577 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Gm11784-201ENSMUST00000118568 474 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Gm15177-201ENSMUST00000120491 577 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Gm15878-201ENSMUST00000127561 306 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Gm26348-201ENSMUST00000157528 240 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Gm24419-201ENSMUST00000157875 332 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Gm22768-201ENSMUST00000158366 153 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Mir3057-201ENSMUST00000175040 91 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Snora3-201ENSMUST00000083082 132 ntBASIC0.87□□□□□ -2.27
Scn8aQ9WTU3 Gm14554-201ENSMUST00000119548 661 ntBASIC0.86□□□□□ -2.27
Scn8aQ9WTU3 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC0.86□□□□□ -2.27
Scn8aQ9WTU3 Gm23605-201ENSMUST00000157255 127 ntBASIC0.86□□□□□ -2.27
Scn8aQ9WTU3 Gm22537-201ENSMUST00000158172 199 ntBASIC0.86□□□□□ -2.27
Scn8aQ9WTU3 Gm22945-201ENSMUST00000158557 157 ntBASIC0.86□□□□□ -2.27
Scn8aQ9WTU3 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
Scn8aQ9WTU3 Mir7683-201ENSMUST00000183842 61 ntBASIC0.86□□□□□ -2.27
Scn8aQ9WTU3 Mir7091-201ENSMUST00000184075 79 ntBASIC0.86□□□□□ -2.27
Scn8aQ9WTU3 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.86□□□□□ -2.27
Scn8aQ9WTU3 Mir3068-202ENSMUST00000197755 79 ntBASIC0.86□□□□□ -2.27
Scn8aQ9WTU3 Gm44446-201ENSMUST00000204864 255 ntBASIC0.86□□□□□ -2.27
Scn8aQ9WTU3 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC0.86□□□□□ -2.27
Scn8aQ9WTU3 AC147633.1-201ENSMUST00000225134 259 ntBASIC0.86□□□□□ -2.27
Scn8aQ9WTU3 Gm26166-201ENSMUST00000083788 107 ntBASIC0.86□□□□□ -2.27
Scn8aQ9WTU3 Gm381-201ENSMUST00000117443 2037 ntBASIC0.86□□□□□ -2.27
Scn8aQ9WTU3 Gm12105-201ENSMUST00000120846 779 ntBASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 Gm25981-201ENSMUST00000157921 295 ntBASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 Gm27660-201ENSMUST00000184028 208 ntBASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 Gm44125-201ENSMUST00000203068 448 ntBASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 Gm2003-201ENSMUST00000118537 636 ntBASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 Gm11219-201ENSMUST00000118565 358 ntBASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 Gm23956-201ENSMUST00000157211 119 ntBASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 Gm22338-201ENSMUST00000157715 129 ntBASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 Gm25936-201ENSMUST00000179952 114 ntBASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 Gm37771-201ENSMUST00000193121 265 ntBASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 Mir3961-201ENSMUST00000198795 59 ntBASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 Gm44554-201ENSMUST00000208738 147 ntBASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 Gm22062-201ENSMUST00000082563 107 ntBASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 Mir27b-201ENSMUST00000083541 73 ntBASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
Scn8aQ9WTU3 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
Scn8aQ9WTU3 Gm23991-201ENSMUST00000117033 93 ntBASIC0.84□□□□□ -2.28
Scn8aQ9WTU3 Gm6829-201ENSMUST00000119858 360 ntBASIC0.84□□□□□ -2.28
Scn8aQ9WTU3 Gm23783-201ENSMUST00000157941 102 ntBASIC0.84□□□□□ -2.28
Scn8aQ9WTU3 Gm25333-201ENSMUST00000158035 246 ntBASIC0.84□□□□□ -2.28
Scn8aQ9WTU3 Gm25166-201ENSMUST00000158909 111 ntBASIC0.84□□□□□ -2.28
Scn8aQ9WTU3 Gm20613-201ENSMUST00000175828 345 ntBASIC0.84□□□□□ -2.28
Scn8aQ9WTU3 Gm16399-201ENSMUST00000181423 219 ntBASIC0.84□□□□□ -2.28
Scn8aQ9WTU3 Gm28862-201ENSMUST00000188246 163 ntBASIC0.84□□□□□ -2.28
Scn8aQ9WTU3 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC0.84□□□□□ -2.28
Scn8aQ9WTU3 Gm45207-201ENSMUST00000207469 145 ntBASIC0.84□□□□□ -2.28
Scn8aQ9WTU3 AC156795.1-201ENSMUST00000214655 414 ntBASIC0.84□□□□□ -2.28
Scn8aQ9WTU3 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.84□□□□□ -2.28
Scn8aQ9WTU3 Gm25799-201ENSMUST00000082643 107 ntBASIC0.84□□□□□ -2.28
Scn8aQ9WTU3 Gm23462-201ENSMUST00000083264 104 ntBASIC0.84□□□□□ -2.28
Scn8aQ9WTU3 Gm25683-201ENSMUST00000083940 131 ntBASIC0.84□□□□□ -2.28
Scn8aQ9WTU3 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
Scn8aQ9WTU3 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 Gm14785-201ENSMUST00000120185 539 ntBASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 Gm23586-201ENSMUST00000157657 123 ntBASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 Gm27715-201ENSMUST00000184714 260 ntBASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 Gm43026-201ENSMUST00000202972 325 ntBASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 Gm45101-201ENSMUST00000208327 232 ntBASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 Gm45387-201ENSMUST00000209792 632 ntBASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 AC147240.1-201ENSMUST00000218767 431 ntBASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 Gm25038-201ENSMUST00000082928 130 ntBASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 Gm43484-201ENSMUST00000198333 5966 ntBASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 Gm44240-201ENSMUST00000204015 2654 ntBASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 Gm14879-201ENSMUST00000117308 507 ntBASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 Gm13577-201ENSMUST00000121365 205 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms