Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 n-R5s50-201ENSMUST00000083168 111 ntBASIC0.21□□□□□ -2.38
Scn11aQ9R053 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC0.21□□□□□ -2.38
Scn11aQ9R053 Gm25611-201ENSMUST00000104017 133 ntBASIC0.2□□□□□ -2.38
Scn11aQ9R053 Gm24552-201ENSMUST00000158646 103 ntBASIC0.2□□□□□ -2.38
Scn11aQ9R053 Gm17052-201ENSMUST00000165496 289 ntBASIC0.2□□□□□ -2.38
Scn11aQ9R053 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
Scn11aQ9R053 Gm2628-201ENSMUST00000218019 426 ntBASIC0.2□□□□□ -2.38
Scn11aQ9R053 Gm26338-201ENSMUST00000102372 110 ntBASIC0.19□□□□□ -2.38
Scn11aQ9R053 Gm16431-201ENSMUST00000117454 431 ntBASIC0.19□□□□□ -2.38
Scn11aQ9R053 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
Scn11aQ9R053 Gm16354-201ENSMUST00000155376 150 ntBASIC0.19□□□□□ -2.38
Scn11aQ9R053 Gm24837-201ENSMUST00000158683 81 ntBASIC0.19□□□□□ -2.38
Scn11aQ9R053 Mir6338-201ENSMUST00000183389 109 ntBASIC0.19□□□□□ -2.38
Scn11aQ9R053 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC0.19□□□□□ -2.38
Scn11aQ9R053 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC0.19□□□□□ -2.38
Scn11aQ9R053 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC0.19□□□□□ -2.38
Scn11aQ9R053 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC0.19□□□□□ -2.38
Scn11aQ9R053 Gm44088-201ENSMUST00000204595 237 ntBASIC0.19□□□□□ -2.38
Scn11aQ9R053 Gm45658-201ENSMUST00000209197 580 ntBASIC0.19□□□□□ -2.38
Scn11aQ9R053 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC0.19□□□□□ -2.38
Scn11aQ9R053 Gm23102-201ENSMUST00000083724 116 ntBASIC0.19□□□□□ -2.38
Scn11aQ9R053 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.19□□□□□ -2.38
Scn11aQ9R053 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.19□□□□□ -2.38
Scn11aQ9R053 Gm14554-201ENSMUST00000119548 661 ntBASIC0.19□□□□□ -2.38
Scn11aQ9R053 Gm11252-201ENSMUST00000120572 939 ntBASIC0.19□□□□□ -2.38
Scn11aQ9R053 Gm24060-201ENSMUST00000157494 95 ntBASIC0.19□□□□□ -2.38
Scn11aQ9R053 Gm23144-201ENSMUST00000180226 107 ntBASIC0.19□□□□□ -2.38
Scn11aQ9R053 Mir6365-201ENSMUST00000183990 101 ntBASIC0.19□□□□□ -2.38
Scn11aQ9R053 Gm18956-201ENSMUST00000192857 480 ntBASIC0.19□□□□□ -2.38
Scn11aQ9R053 Gm19147-201ENSMUST00000199622 652 ntBASIC0.19□□□□□ -2.38
Scn11aQ9R053 AC122901.2-201ENSMUST00000216926 285 ntBASIC0.19□□□□□ -2.38
Scn11aQ9R053 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
Scn11aQ9R053 Mir429-201ENSMUST00000083493 83 ntBASIC0.19□□□□□ -2.38
Scn11aQ9R053 Gm14795-201ENSMUST00000118461 471 ntBASIC0.18□□□□□ -2.38
Scn11aQ9R053 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.18□□□□□ -2.38
Scn11aQ9R053 Gm27402-201ENSMUST00000183890 120 ntBASIC0.18□□□□□ -2.38
Scn11aQ9R053 Gm28000-201ENSMUST00000184380 85 ntBASIC0.18□□□□□ -2.38
Scn11aQ9R053 CT030194.2-201ENSMUST00000225752 379 ntBASIC0.18□□□□□ -2.38
Scn11aQ9R053 Snord49b-201ENSMUST00000082503 72 ntBASIC0.18□□□□□ -2.38
Scn11aQ9R053 Gm24588-201ENSMUST00000116696 83 ntBASIC0.17□□□□□ -2.38
Scn11aQ9R053 Gm12053-201ENSMUST00000119022 252 ntBASIC0.17□□□□□ -2.38
Scn11aQ9R053 Gm14623-201ENSMUST00000121398 603 ntBASIC0.17□□□□□ -2.38
Scn11aQ9R053 Gm24925-201ENSMUST00000178157 107 ntBASIC0.17□□□□□ -2.38
Scn11aQ9R053 Gm20874-201ENSMUST00000178356 663 ntBASIC0.17□□□□□ -2.38
Scn11aQ9R053 AC154636.3-201ENSMUST00000221489 1214 ntBASIC0.17□□□□□ -2.38
Scn11aQ9R053 AC173482.2-201ENSMUST00000224044 750 ntBASIC0.17□□□□□ -2.38
Scn11aQ9R053 Gm13723-201ENSMUST00000130722 5036 ntAPPRIS P1 TSL 2 BASIC0.17□□□□□ -2.38
Scn11aQ9R053 Gm14774-201ENSMUST00000117857 536 ntBASIC0.17□□□□□ -2.38
Scn11aQ9R053 Gm6587-201ENSMUST00000120219 613 ntBASIC0.17□□□□□ -2.38
Scn11aQ9R053 Gm26256-201ENSMUST00000122499 186 ntBASIC0.17□□□□□ -2.38
Scn11aQ9R053 Gm22233-201ENSMUST00000157464 114 ntBASIC0.17□□□□□ -2.38
Scn11aQ9R053 Gm25868-201ENSMUST00000158253 114 ntBASIC0.17□□□□□ -2.38
Scn11aQ9R053 Trbv24-201ENSMUST00000194614 347 ntBASIC0.17□□□□□ -2.38
Scn11aQ9R053 Gm42509-201ENSMUST00000197390 781 ntBASIC0.17□□□□□ -2.38
Scn11aQ9R053 Snord95-201ENSMUST00000082846 68 ntBASIC0.17□□□□□ -2.38
Scn11aQ9R053 Mir362-201ENSMUST00000093592 65 ntBASIC0.17□□□□□ -2.38
Scn11aQ9R053 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.16□□□□□ -2.38
Scn11aQ9R053 Gm15381-201ENSMUST00000121501 1156 ntBASIC0.16□□□□□ -2.38
Scn11aQ9R053 Gm23205-201ENSMUST00000158671 103 ntBASIC0.16□□□□□ -2.38
Scn11aQ9R053 Gm42570-201ENSMUST00000195937 292 ntBASIC0.16□□□□□ -2.38
Scn11aQ9R053 AC122887.2-201ENSMUST00000219465 1603 ntBASIC0.15□□□□□ -2.39
Scn11aQ9R053 Gm22755-201ENSMUST00000157143 100 ntBASIC0.15□□□□□ -2.39
Scn11aQ9R053 Gm26038-201ENSMUST00000158151 106 ntBASIC0.15□□□□□ -2.39
Scn11aQ9R053 Scarna8-201ENSMUST00000158333 131 ntBASIC0.15□□□□□ -2.39
Scn11aQ9R053 Gm23761-201ENSMUST00000158347 104 ntBASIC0.15□□□□□ -2.39
Scn11aQ9R053 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC0.15□□□□□ -2.39
Scn11aQ9R053 DQ267101-201ENSMUST00000082562 73 ntBASIC0.15□□□□□ -2.39
Scn11aQ9R053 Mir695-201ENSMUST00000102261 109 ntBASIC0.14□□□□□ -2.39
Scn11aQ9R053 Mir544-201ENSMUST00000103813 78 ntBASIC0.14□□□□□ -2.39
Scn11aQ9R053 Gm43531-201ENSMUST00000200676 1114 ntBASIC0.14□□□□□ -2.39
Scn11aQ9R053 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC0.14□□□□□ -2.39
Scn11aQ9R053 Gm22997-201ENSMUST00000082845 107 ntBASIC0.14□□□□□ -2.39
Scn11aQ9R053 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
Scn11aQ9R053 Mir574-201ENSMUST00000103854 78 ntBASIC0.14□□□□□ -2.39
Scn11aQ9R053 Gm15213-201ENSMUST00000122098 216 ntBASIC0.14□□□□□ -2.39
Scn11aQ9R053 Gm15214-201ENSMUST00000122155 470 ntBASIC0.14□□□□□ -2.39
Scn11aQ9R053 Gm24963-201ENSMUST00000157916 144 ntBASIC0.14□□□□□ -2.39
Scn11aQ9R053 Gm17528-201ENSMUST00000171026 239 ntBASIC0.14□□□□□ -2.39
Scn11aQ9R053 Gm37771-201ENSMUST00000193121 265 ntBASIC0.14□□□□□ -2.39
Scn11aQ9R053 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.14□□□□□ -2.39
Scn11aQ9R053 Gm45439-201ENSMUST00000211723 359 ntBASIC0.14□□□□□ -2.39
Scn11aQ9R053 Olfr575-201ENSMUST00000084812 957 ntBASIC0.14□□□□□ -2.39
Scn11aQ9R053 Gm22796-201ENSMUST00000157234 106 ntBASIC0.13□□□□□ -2.39
Scn11aQ9R053 Gm24419-201ENSMUST00000157875 332 ntBASIC0.13□□□□□ -2.39
Scn11aQ9R053 Gm22768-201ENSMUST00000158366 153 ntBASIC0.13□□□□□ -2.39
Scn11aQ9R053 Gm24056-201ENSMUST00000158617 146 ntBASIC0.13□□□□□ -2.39
Scn11aQ9R053 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
Scn11aQ9R053 Gm29575-201ENSMUST00000190597 315 ntBASIC0.13□□□□□ -2.39
Scn11aQ9R053 Gm44607-201ENSMUST00000205611 1090 ntBASIC0.13□□□□□ -2.39
Scn11aQ9R053 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC0.13□□□□□ -2.39
Scn11aQ9R053 AC133076.1-201ENSMUST00000228074 484 ntBASIC0.13□□□□□ -2.39
Scn11aQ9R053 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC0.13□□□□□ -2.39
Scn11aQ9R053 Mirlet7d-201ENSMUST00000083519 103 ntBASIC0.13□□□□□ -2.39
Scn11aQ9R053 Gm22817-201ENSMUST00000157448 356 ntBASIC0.12□□□□□ -2.39
Scn11aQ9R053 Gm22983-201ENSMUST00000158308 104 ntBASIC0.12□□□□□ -2.39
Scn11aQ9R053 Gm27599-201ENSMUST00000183758 174 ntBASIC0.12□□□□□ -2.39
Scn11aQ9R053 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.12□□□□□ -2.39
Scn11aQ9R053 Ighv1-6-201ENSMUST00000193849 293 ntBASIC0.12□□□□□ -2.39
Scn11aQ9R053 AC134917.1-201ENSMUST00000220517 1449 ntBASIC0.12□□□□□ -2.39
Scn11aQ9R053 Gm25589-201ENSMUST00000082502 166 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 76,532 protein–RNA pairs in 267.9 ms