Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Gm26015-201ENSMUST00000104402 125 ntBASIC2.46□□□□□ -2.02
Cpsf3Q9QXK7 Gm13880-201ENSMUST00000118421 474 ntBASIC2.46□□□□□ -2.02
Cpsf3Q9QXK7 Gm27510-201ENSMUST00000158214 64 ntBASIC2.46□□□□□ -2.02
Cpsf3Q9QXK7 Gm16561-201ENSMUST00000163001 192 ntBASIC2.46□□□□□ -2.02
Cpsf3Q9QXK7 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Cpsf3Q9QXK7 Gm7925-201ENSMUST00000166690 401 ntBASIC2.46□□□□□ -2.02
Cpsf3Q9QXK7 Gm4468-201ENSMUST00000170206 294 ntBASIC2.46□□□□□ -2.02
Cpsf3Q9QXK7 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Cpsf3Q9QXK7 Gm18971-201ENSMUST00000197240 374 ntBASIC2.46□□□□□ -2.02
Cpsf3Q9QXK7 Gm43510-201ENSMUST00000197922 353 ntBASIC2.46□□□□□ -2.02
Cpsf3Q9QXK7 Mir497-201ENSMUST00000200557 84 ntBASIC2.46□□□□□ -2.02
Cpsf3Q9QXK7 Gm17990-201ENSMUST00000211728 553 ntBASIC2.46□□□□□ -2.02
Cpsf3Q9QXK7 Gm8940-201ENSMUST00000212585 219 ntBASIC2.46□□□□□ -2.02
Cpsf3Q9QXK7 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.46□□□□□ -2.02
Cpsf3Q9QXK7 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC2.46□□□□□ -2.02
Cpsf3Q9QXK7 Gm26342-201ENSMUST00000104557 129 ntBASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 Gm7164-201ENSMUST00000117503 450 ntBASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 Gm14652-201ENSMUST00000118479 235 ntBASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 Gm11420-201ENSMUST00000120047 402 ntBASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 Gm23033-201ENSMUST00000157996 134 ntBASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 Gm25335-201ENSMUST00000158043 103 ntBASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 Gm38050-201ENSMUST00000191904 238 ntBASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 Gm43723-201ENSMUST00000196886 189 ntBASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 Gm44459-201ENSMUST00000203926 160 ntBASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 Gm26056-201ENSMUST00000083043 104 ntBASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 Gm22154-201ENSMUST00000083844 131 ntBASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Cpsf3Q9QXK7 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 Gm25970-201ENSMUST00000157165 86 ntBASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 Gm24846-201ENSMUST00000158033 108 ntBASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 Gm27399-201ENSMUST00000184250 78 ntBASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 Mir195b-201ENSMUST00000184814 97 ntBASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 Gm28740-201ENSMUST00000186142 215 ntBASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 Gm44256-201ENSMUST00000203304 335 ntBASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 Gm44149-201ENSMUST00000204256 226 ntBASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 AC117202.2-201ENSMUST00000226491 1101 ntBASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.44□□□□□ -2.02
Cpsf3Q9QXK7 Gm24582-201ENSMUST00000103967 103 ntBASIC2.43□□□□□ -2.02
Cpsf3Q9QXK7 Gm13457-201ENSMUST00000117885 267 ntBASIC2.43□□□□□ -2.02
Cpsf3Q9QXK7 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.43□□□□□ -2.02
Cpsf3Q9QXK7 Mir5101-201ENSMUST00000175181 83 ntBASIC2.43□□□□□ -2.02
Cpsf3Q9QXK7 Gm23191-201ENSMUST00000179147 107 ntBASIC2.43□□□□□ -2.02
Cpsf3Q9QXK7 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC2.43□□□□□ -2.02
Cpsf3Q9QXK7 Gm45445-201ENSMUST00000209586 232 ntBASIC2.43□□□□□ -2.02
Cpsf3Q9QXK7 AC164567.2-201ENSMUST00000219363 445 ntBASIC2.43□□□□□ -2.02
Cpsf3Q9QXK7 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.43□□□□□ -2.02
Cpsf3Q9QXK7 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Cpsf3Q9QXK7 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.43□□□□□ -2.02
Cpsf3Q9QXK7 Mir423-201ENSMUST00000083584 109 ntBASIC2.43□□□□□ -2.02
Cpsf3Q9QXK7 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Cpsf3Q9QXK7 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Gm11460-201ENSMUST00000118200 361 ntBASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Gm12934-201ENSMUST00000119221 343 ntBASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Gm26102-201ENSMUST00000157251 284 ntBASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Gm23829-201ENSMUST00000157392 270 ntBASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Gm25910-201ENSMUST00000157620 140 ntBASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Mir5118-201ENSMUST00000175551 67 ntBASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Gm28951-201ENSMUST00000190742 313 ntBASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Gm37054-201ENSMUST00000193481 543 ntBASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Gm32033-201ENSMUST00000193483 339 ntBASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Gm44477-201ENSMUST00000199661 110 ntBASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Gm45013-201ENSMUST00000206883 178 ntBASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Gm25801-201ENSMUST00000082638 106 ntBASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Cpsf3Q9QXK7 Snord98-201ENSMUST00000116819 65 ntBASIC2.41□□□□□ -2.02
Cpsf3Q9QXK7 Gm15211-201ENSMUST00000118932 528 ntBASIC2.41□□□□□ -2.02
Cpsf3Q9QXK7 Gm14287-201ENSMUST00000121060 117 ntBASIC2.41□□□□□ -2.02
Cpsf3Q9QXK7 Gm24481-201ENSMUST00000157210 102 ntBASIC2.41□□□□□ -2.02
Cpsf3Q9QXK7 Gm22483-201ENSMUST00000157986 274 ntBASIC2.41□□□□□ -2.02
Cpsf3Q9QXK7 Gm25642-201ENSMUST00000175137 66 ntBASIC2.41□□□□□ -2.02
Cpsf3Q9QXK7 Mir3103-201ENSMUST00000175474 67 ntBASIC2.41□□□□□ -2.02
Cpsf3Q9QXK7 Gm24304-201ENSMUST00000177635 107 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms