Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Gm46993-201ENSMUST00000220708 259 ntBASIC3.09□□□□□ -1.91
Ldb3Q9JKS4 Mir146-201ENSMUST00000083667 65 ntBASIC3.09□□□□□ -1.91
Ldb3Q9JKS4 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.09□□□□□ -1.91
Ldb3Q9JKS4 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Ldb3Q9JKS4 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC3.09□□□□□ -1.92
Ldb3Q9JKS4 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.92
Ldb3Q9JKS4 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Gm12934-201ENSMUST00000119221 343 ntBASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Gm24936-201ENSMUST00000122598 247 ntBASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Gm22217-201ENSMUST00000157556 313 ntBASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Gm22097-201ENSMUST00000157929 278 ntBASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Gm22989-201ENSMUST00000158313 86 ntBASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Gm22767-201ENSMUST00000158365 165 ntBASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Gm43680-201ENSMUST00000199466 340 ntBASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Gm43746-201ENSMUST00000200028 317 ntBASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Gm21007-201ENSMUST00000221024 326 ntBASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Gm10298-201ENSMUST00000074801 265 ntBASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Gm24966-201ENSMUST00000082443 79 ntBASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Snora7a-201ENSMUST00000082629 140 ntBASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Mir208a-201ENSMUST00000083498 83 ntBASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Gm10161-201ENSMUST00000091506 204 ntBASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Ldb3Q9JKS4 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm37479-201ENSMUST00000194169 3841 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm23530-201ENSMUST00000104564 137 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm12443-201ENSMUST00000122308 323 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm22036-201ENSMUST00000157279 215 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm22883-201ENSMUST00000157376 106 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm24008-201ENSMUST00000157733 138 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm25920-201ENSMUST00000158307 99 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm24930-201ENSMUST00000158315 83 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm25519-201ENSMUST00000158392 127 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Mir669k-201ENSMUST00000177742 127 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Mir466b-1-201ENSMUST00000177988 82 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm25673-201ENSMUST00000179957 127 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm28825-201ENSMUST00000186233 238 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Trbv6-201ENSMUST00000193743 276 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm42526-201ENSMUST00000198956 393 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm19244-201ENSMUST00000204340 253 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm44703-201ENSMUST00000205724 248 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm44563-201ENSMUST00000207958 178 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 AC154994.1-201ENSMUST00000217395 302 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm25813-201ENSMUST00000082748 191 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Mir302d-201ENSMUST00000083513 66 ntBASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Ldb3Q9JKS4 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Gm25764-201ENSMUST00000104092 134 ntBASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Gm25879-201ENSMUST00000104330 107 ntBASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Gm14073-201ENSMUST00000117344 381 ntBASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Gm12304-201ENSMUST00000120312 385 ntBASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Gm14881-201ENSMUST00000120366 372 ntBASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Gm14402-201ENSMUST00000122217 508 ntBASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Gm23277-201ENSMUST00000157914 136 ntBASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Gm22516-201ENSMUST00000158266 124 ntBASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Gm25835-201ENSMUST00000158917 144 ntBASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Gm25071-201ENSMUST00000175232 70 ntBASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Gm5358-201ENSMUST00000212814 353 ntBASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 AC154282.1-201ENSMUST00000223154 265 ntBASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Gm10360-201ENSMUST00000097219 272 ntBASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ldb3Q9JKS4 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms