Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC0.82□□□□□ -2.28
Trem3Q9JKE1 Gm17911-201ENSMUST00000210806 877 ntBASIC0.82□□□□□ -2.28
Trem3Q9JKE1 Gm21089-201ENSMUST00000215843 325 ntBASIC0.82□□□□□ -2.28
Trem3Q9JKE1 AC122242.1-201ENSMUST00000224650 304 ntBASIC0.82□□□□□ -2.28
Trem3Q9JKE1 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.82□□□□□ -2.28
Trem3Q9JKE1 Snord96a-201ENSMUST00000082791 81 ntBASIC0.82□□□□□ -2.28
Trem3Q9JKE1 Gm26263-201ENSMUST00000083281 164 ntBASIC0.82□□□□□ -2.28
Trem3Q9JKE1 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.82□□□□□ -2.28
Trem3Q9JKE1 Mir22-201ENSMUST00000083595 95 ntBASIC0.82□□□□□ -2.28
Trem3Q9JKE1 Gm37061-201ENSMUST00000195066 3243 ntBASIC0.82□□□□□ -2.28
Trem3Q9JKE1 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
Trem3Q9JKE1 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Trem3Q9JKE1 Gm15365-201ENSMUST00000122392 300 ntBASIC0.81□□□□□ -2.28
Trem3Q9JKE1 Gm24598-201ENSMUST00000122510 74 ntBASIC0.81□□□□□ -2.28
Trem3Q9JKE1 Gm23124-201ENSMUST00000157650 107 ntBASIC0.81□□□□□ -2.28
Trem3Q9JKE1 Gm22764-201ENSMUST00000158370 92 ntBASIC0.81□□□□□ -2.28
Trem3Q9JKE1 Gm26029-201ENSMUST00000158659 132 ntBASIC0.81□□□□□ -2.28
Trem3Q9JKE1 Gm23090-201ENSMUST00000177331 78 ntBASIC0.81□□□□□ -2.28
Trem3Q9JKE1 Gm27028-201ENSMUST00000182303 399 ntBASIC0.81□□□□□ -2.28
Trem3Q9JKE1 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC0.81□□□□□ -2.28
Trem3Q9JKE1 Ighv2-8-201ENSMUST00000193935 262 ntBASIC0.81□□□□□ -2.28
Trem3Q9JKE1 Igkv15-102-201ENSMUST00000197885 287 ntBASIC0.81□□□□□ -2.28
Trem3Q9JKE1 Trav15d-3-201ENSMUST00000198604 167 ntBASIC0.81□□□□□ -2.28
Trem3Q9JKE1 Trav15n-3-201ENSMUST00000200498 168 ntBASIC0.81□□□□□ -2.28
Trem3Q9JKE1 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.81□□□□□ -2.28
Trem3Q9JKE1 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.81□□□□□ -2.28
Trem3Q9JKE1 AC154552.7-201ENSMUST00000222824 156 ntBASIC0.81□□□□□ -2.28
Trem3Q9JKE1 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.81□□□□□ -2.28
Trem3Q9JKE1 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Trem3Q9JKE1 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC0.8□□□□□ -2.28
Trem3Q9JKE1 Gm14972-201ENSMUST00000121780 364 ntBASIC0.8□□□□□ -2.28
Trem3Q9JKE1 n-R5s150-201ENSMUST00000122705 108 ntBASIC0.8□□□□□ -2.28
Trem3Q9JKE1 Gm23829-201ENSMUST00000157392 270 ntBASIC0.8□□□□□ -2.28
Trem3Q9JKE1 Gm22425-201ENSMUST00000158532 138 ntBASIC0.8□□□□□ -2.28
Trem3Q9JKE1 Mir3098-201ENSMUST00000175416 87 ntBASIC0.8□□□□□ -2.28
Trem3Q9JKE1 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC0.8□□□□□ -2.28
Trem3Q9JKE1 Gm25361-201ENSMUST00000179358 76 ntBASIC0.8□□□□□ -2.28
Trem3Q9JKE1 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
Trem3Q9JKE1 Gm28412-201ENSMUST00000187243 177 ntBASIC0.8□□□□□ -2.28
Trem3Q9JKE1 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
Trem3Q9JKE1 Gm38146-201ENSMUST00000194121 1293 ntBASIC0.8□□□□□ -2.28
Trem3Q9JKE1 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Trem3Q9JKE1 AC129202.1-201ENSMUST00000224895 526 ntBASIC0.8□□□□□ -2.28
Trem3Q9JKE1 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
Trem3Q9JKE1 Gm26446-201ENSMUST00000082455 103 ntBASIC0.8□□□□□ -2.28
Trem3Q9JKE1 Gm23102-201ENSMUST00000083724 116 ntBASIC0.8□□□□□ -2.28
Trem3Q9JKE1 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Trem3Q9JKE1 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Trem3Q9JKE1 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
Trem3Q9JKE1 Gm2003-201ENSMUST00000118537 636 ntBASIC0.79□□□□□ -2.28
Trem3Q9JKE1 Gm15214-201ENSMUST00000122155 470 ntBASIC0.79□□□□□ -2.28
Trem3Q9JKE1 Gm24480-201ENSMUST00000157442 103 ntBASIC0.79□□□□□ -2.28
Trem3Q9JKE1 Gm25914-201ENSMUST00000157618 153 ntBASIC0.79□□□□□ -2.28
Trem3Q9JKE1 Gm22164-201ENSMUST00000158413 106 ntBASIC0.79□□□□□ -2.28
Trem3Q9JKE1 Gm23387-201ENSMUST00000158586 107 ntBASIC0.79□□□□□ -2.28
Trem3Q9JKE1 Gm23208-201ENSMUST00000158666 127 ntBASIC0.79□□□□□ -2.28
Trem3Q9JKE1 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC0.79□□□□□ -2.28
Trem3Q9JKE1 Gm28283-201ENSMUST00000185509 178 ntBASIC0.79□□□□□ -2.28
Trem3Q9JKE1 Gm37361-201ENSMUST00000194345 132 ntBASIC0.79□□□□□ -2.28
Trem3Q9JKE1 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
Trem3Q9JKE1 AC139186.1-201ENSMUST00000197610 94 ntBASIC0.79□□□□□ -2.28
Trem3Q9JKE1 Gm2829-201ENSMUST00000213121 499 ntBASIC0.79□□□□□ -2.28
Trem3Q9JKE1 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.79□□□□□ -2.28
Trem3Q9JKE1 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC0.79□□□□□ -2.28
Trem3Q9JKE1 CT030684.2-201ENSMUST00000228946 826 ntBASIC0.79□□□□□ -2.28
Trem3Q9JKE1 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Trem3Q9JKE1 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.79□□□□□ -2.28
Trem3Q9JKE1 Snora41-201ENSMUST00000082668 132 ntBASIC0.79□□□□□ -2.28
Trem3Q9JKE1 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
Trem3Q9JKE1 AC124456.1-201ENSMUST00000217391 2597 ntBASIC0.79□□□□□ -2.28
Trem3Q9JKE1 Gm22780-201ENSMUST00000104084 132 ntBASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Gm14551-201ENSMUST00000120802 256 ntBASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Gm14366-201ENSMUST00000121970 730 ntBASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Gm24896-201ENSMUST00000122741 135 ntBASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Gm23670-201ENSMUST00000157469 119 ntBASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Gm25365-201ENSMUST00000158852 121 ntBASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Gm15914-201ENSMUST00000161922 309 ntBASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Gm20613-201ENSMUST00000175828 345 ntBASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Mir8119-201ENSMUST00000183371 129 ntBASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Mir6380-201ENSMUST00000184334 81 ntBASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Trbv24-201ENSMUST00000194614 347 ntBASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Gm18546-201ENSMUST00000197245 676 ntBASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Gm44408-201ENSMUST00000200205 66 ntBASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Gm17990-201ENSMUST00000211728 553 ntBASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.78□□□□□ -2.28
Trem3Q9JKE1 AC154252.1-201ENSMUST00000226041 473 ntBASIC0.78□□□□□ -2.28
Trem3Q9JKE1 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Gm22810-201ENSMUST00000082741 158 ntBASIC0.78□□□□□ -2.28
Trem3Q9JKE1 Gm22005-201ENSMUST00000082795 141 ntBASIC0.78□□□□□ -2.28
Trem3Q9JKE1 AC163660.3-201ENSMUST00000224253 1563 ntBASIC0.78□□□□□ -2.29
Trem3Q9JKE1 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
Trem3Q9JKE1 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Trem3Q9JKE1 Mir687-201ENSMUST00000102166 89 ntBASIC0.77□□□□□ -2.29
Trem3Q9JKE1 Gm23744-201ENSMUST00000104231 149 ntBASIC0.77□□□□□ -2.29
Trem3Q9JKE1 Gm15090-201ENSMUST00000118787 1196 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms