Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm45678-201ENSMUST00000210509 295 ntBASIC2.91□□□□□ -1.94
Trim54Q9ERP3 AC166341.3-201ENSMUST00000221861 114 ntBASIC2.91□□□□□ -1.94
Trim54Q9ERP3 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.91□□□□□ -1.94
Trim54Q9ERP3 Gm23247-201ENSMUST00000083373 107 ntBASIC2.91□□□□□ -1.94
Trim54Q9ERP3 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
Trim54Q9ERP3 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.9□□□□□ -1.95
Trim54Q9ERP3 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.9□□□□□ -1.95
Trim54Q9ERP3 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Trim54Q9ERP3 Snord14c-201ENSMUST00000101927 86 ntBASIC2.9□□□□□ -1.95
Trim54Q9ERP3 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.9□□□□□ -1.95
Trim54Q9ERP3 Gm6956-201ENSMUST00000134724 546 ntBASIC2.9□□□□□ -1.95
Trim54Q9ERP3 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.9□□□□□ -1.95
Trim54Q9ERP3 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.9□□□□□ -1.95
Trim54Q9ERP3 Gm16111-201ENSMUST00000162128 285 ntBASIC2.9□□□□□ -1.95
Trim54Q9ERP3 Gm28008-201ENSMUST00000184021 186 ntBASIC2.9□□□□□ -1.95
Trim54Q9ERP3 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.9□□□□□ -1.95
Trim54Q9ERP3 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.9□□□□□ -1.95
Trim54Q9ERP3 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.9□□□□□ -1.95
Trim54Q9ERP3 Snord68-201ENSMUST00000082516 86 ntBASIC2.9□□□□□ -1.95
Trim54Q9ERP3 Gm26458-201ENSMUST00000082832 128 ntBASIC2.9□□□□□ -1.95
Trim54Q9ERP3 Gm25651-201ENSMUST00000083782 119 ntBASIC2.9□□□□□ -1.95
Trim54Q9ERP3 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Trim54Q9ERP3 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Trim54Q9ERP3 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.9□□□□□ -1.95
Trim54Q9ERP3 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Gm24126-201ENSMUST00000104111 106 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Mir878-201ENSMUST00000104680 78 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Gm16362-201ENSMUST00000135189 214 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Gm16358-201ENSMUST00000146046 210 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Gm26102-201ENSMUST00000157251 284 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Gm22527-201ENSMUST00000158816 106 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Gm26400-201ENSMUST00000175012 85 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Mir7068-201ENSMUST00000183439 74 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Mir7013-201ENSMUST00000183540 72 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Mir7014-201ENSMUST00000183853 63 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Mir7050-201ENSMUST00000184636 60 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Gm43669-201ENSMUST00000198229 436 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Gm43680-201ENSMUST00000199466 340 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Gm44468-201ENSMUST00000199516 105 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Gm40810-201ENSMUST00000219149 253 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.89□□□□□ -1.95
Trim54Q9ERP3 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Gm26494-201ENSMUST00000083154 143 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Gm24493-201ENSMUST00000083805 143 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Gm23345-201ENSMUST00000083817 150 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Trim54Q9ERP3 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Trim54Q9ERP3 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Trim54Q9ERP3 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
Trim54Q9ERP3 Mir682-201ENSMUST00000102281 96 ntBASIC2.88□□□□□ -1.95
Trim54Q9ERP3 Gm13672-201ENSMUST00000117554 459 ntBASIC2.88□□□□□ -1.95
Trim54Q9ERP3 Gm23120-201ENSMUST00000157654 287 ntBASIC2.88□□□□□ -1.95
Trim54Q9ERP3 Gm23588-201ENSMUST00000157659 99 ntBASIC2.88□□□□□ -1.95
Trim54Q9ERP3 Gm22330-201ENSMUST00000158068 115 ntBASIC2.88□□□□□ -1.95
Trim54Q9ERP3 Gm22113-201ENSMUST00000158343 104 ntBASIC2.88□□□□□ -1.95
Trim54Q9ERP3 Gm24878-201ENSMUST00000158782 104 ntBASIC2.88□□□□□ -1.95
Trim54Q9ERP3 Gm25707-201ENSMUST00000175120 96 ntBASIC2.88□□□□□ -1.95
Trim54Q9ERP3 Gm22308-201ENSMUST00000177609 107 ntBASIC2.88□□□□□ -1.95
Trim54Q9ERP3 Gm27905-201ENSMUST00000184005 207 ntBASIC2.88□□□□□ -1.95
Trim54Q9ERP3 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC2.88□□□□□ -1.95
Trim54Q9ERP3 AC130829.3-201ENSMUST00000222735 154 ntBASIC2.88□□□□□ -1.95
Trim54Q9ERP3 Gm22997-201ENSMUST00000082845 107 ntBASIC2.88□□□□□ -1.95
Trim54Q9ERP3 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
Trim54Q9ERP3 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.88□□□□□ -1.95
Trim54Q9ERP3 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Trim54Q9ERP3 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.88□□□□□ -1.95
Trim54Q9ERP3 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.88□□□□□ -1.95
Trim54Q9ERP3 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Gm24670-201ENSMUST00000104154 132 ntBASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Gm24274-201ENSMUST00000116787 124 ntBASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Gm11859-201ENSMUST00000118099 455 ntBASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Gm11460-201ENSMUST00000118200 361 ntBASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Gm15497-201ENSMUST00000119137 551 ntBASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Gm27396-201ENSMUST00000157708 58 ntBASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Gm24846-201ENSMUST00000158033 108 ntBASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Gm8338-201ENSMUST00000163928 363 ntBASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Gm4468-201ENSMUST00000170206 294 ntBASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Gm21978-201ENSMUST00000179696 377 ntBASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Gm28900-201ENSMUST00000185232 156 ntBASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Gm44063-201ENSMUST00000203307 376 ntBASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
Trim54Q9ERP3 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.87□□□□□ -1.95
Trim54Q9ERP3 AC122905.2-201ENSMUST00000220325 269 ntBASIC2.87□□□□□ -1.95
Trim54Q9ERP3 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Gm22622-201ENSMUST00000082870 129 ntBASIC2.87□□□□□ -1.95
Trim54Q9ERP3 Gm25896-201ENSMUST00000083713 136 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms