Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm23586-201ENSMUST00000157657 123 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Gm25454-201ENSMUST00000157947 315 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Gm22768-201ENSMUST00000158366 153 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Gm20543-201ENSMUST00000174200 726 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Gm25730-201ENSMUST00000178753 165 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Gm21894-201ENSMUST00000179631 546 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Gm27659-201ENSMUST00000183472 98 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Gm28474-201ENSMUST00000188501 315 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Gm43510-201ENSMUST00000197922 353 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 AC167192.4-201ENSMUST00000224087 993 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 CT010506.2-201ENSMUST00000225618 183 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Gm22620-201ENSMUST00000082700 133 ntBASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.35□□□□□ -2.19
Lima1Q9ERG0 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
Lima1Q9ERG0 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
Lima1Q9ERG0 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC1.34□□□□□ -2.19
Lima1Q9ERG0 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC1.34□□□□□ -2.19
Lima1Q9ERG0 Gm14785-201ENSMUST00000120185 539 ntBASIC1.34□□□□□ -2.19
Lima1Q9ERG0 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.34□□□□□ -2.19
Lima1Q9ERG0 Gm6956-201ENSMUST00000134724 546 ntBASIC1.34□□□□□ -2.19
Lima1Q9ERG0 Gm25958-201ENSMUST00000175114 71 ntBASIC1.34□□□□□ -2.19
Lima1Q9ERG0 Gm24573-201ENSMUST00000175499 112 ntBASIC1.34□□□□□ -2.19
Lima1Q9ERG0 Gm9022-202ENSMUST00000183285 483 ntBASIC1.34□□□□□ -2.19
Lima1Q9ERG0 Gm17771-201ENSMUST00000194477 1147 ntBASIC1.34□□□□□ -2.19
Lima1Q9ERG0 Gm42509-201ENSMUST00000197390 781 ntBASIC1.34□□□□□ -2.19
Lima1Q9ERG0 Gm42164-201ENSMUST00000198881 379 ntBASIC1.34□□□□□ -2.19
Lima1Q9ERG0 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.34□□□□□ -2.19
Lima1Q9ERG0 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.34□□□□□ -2.19
Lima1Q9ERG0 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.34□□□□□ -2.19
Lima1Q9ERG0 AC102291.2-201ENSMUST00000228083 367 ntBASIC1.34□□□□□ -2.19
Lima1Q9ERG0 Gm25698-201ENSMUST00000082897 107 ntBASIC1.34□□□□□ -2.19
Lima1Q9ERG0 Gm25404-201ENSMUST00000082970 107 ntBASIC1.34□□□□□ -2.19
Lima1Q9ERG0 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Gm23907-201ENSMUST00000104595 189 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Mir190b-201ENSMUST00000104803 80 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Gm14882-201ENSMUST00000117216 218 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Gm14551-201ENSMUST00000120802 256 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Gm25012-201ENSMUST00000158396 164 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Gm22076-201ENSMUST00000158601 84 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Gm24677-201ENSMUST00000158755 150 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Gm23777-201ENSMUST00000158994 259 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Gm27711-201ENSMUST00000183802 118 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Gm43529-201ENSMUST00000199178 412 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Gm43004-201ENSMUST00000201872 703 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 4930431P19Rik-201ENSMUST00000207570 451 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Gm18774-201ENSMUST00000218269 601 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
Lima1Q9ERG0 CT009733.1-203ENSMUST00000224033 451 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 AC170810.3-201ENSMUST00000226177 374 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 AC166344.2-201ENSMUST00000226747 374 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Ear14-201ENSMUST00000049559 468 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Gm22299-201ENSMUST00000082663 136 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Mir10a-201ENSMUST00000083585 110 ntBASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC1.33□□□□□ -2.2
Lima1Q9ERG0 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.33□□□□□ -2.2
Lima1Q9ERG0 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Gm22831-201ENSMUST00000102473 109 ntBASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Gm24419-201ENSMUST00000157875 332 ntBASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Gm23269-201ENSMUST00000178701 107 ntBASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Gm27493-201ENSMUST00000184128 78 ntBASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Gm44483-201ENSMUST00000197203 97 ntBASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Gm31230-201ENSMUST00000199725 785 ntBASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Gm42960-201ENSMUST00000202160 241 ntBASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Gm44449-201ENSMUST00000203610 153 ntBASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Gm44990-201ENSMUST00000203922 217 ntBASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Gm45116-201ENSMUST00000207392 275 ntBASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Gm22062-201ENSMUST00000082563 107 ntBASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Gm22997-201ENSMUST00000082845 107 ntBASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Gm24490-201ENSMUST00000083803 98 ntBASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Mir463-201ENSMUST00000093570 75 ntBASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Mir452-201ENSMUST00000093629 85 ntBASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.32□□□□□ -2.2
Lima1Q9ERG0 Mir653-201ENSMUST00000102402 85 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Gm24865-201ENSMUST00000103246 96 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Gm14638-201ENSMUST00000121338 216 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Gm6025-201ENSMUST00000121517 201 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Gm23184-201ENSMUST00000122594 131 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.31□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms