Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm12006-201ENSMUST00000120786 403 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm22389-201ENSMUST00000158193 301 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm23190-201ENSMUST00000180307 64 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm23862-201ENSMUST00000180342 94 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm42475-201ENSMUST00000201212 295 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm35558-203ENSMUST00000222264 204 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm23097-201ENSMUST00000083448 105 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm3563-201ENSMUST00000172963 1628 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Mir450-2-201ENSMUST00000102444 69 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm12225-201ENSMUST00000117995 298 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm15807-201ENSMUST00000119880 1128 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm22563-201ENSMUST00000157333 269 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Mir7063-201ENSMUST00000184158 91 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm38167-201ENSMUST00000195704 1178 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm9402-201ENSMUST00000196849 388 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm43723-201ENSMUST00000196886 189 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm43739-201ENSMUST00000198294 307 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm45071-201ENSMUST00000205353 571 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm16976-205ENSMUST00000227324 226 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Gm26108-201ENSMUST00000083973 191 ntBASIC2.14□□□□□ -2.07
Scn4aQ9ER60 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Scn4aQ9ER60 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Scn4aQ9ER60 Gm13804-201ENSMUST00000119552 172 ntBASIC2.13□□□□□ -2.07
Scn4aQ9ER60 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC2.13□□□□□ -2.07
Scn4aQ9ER60 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
Scn4aQ9ER60 Gm16354-201ENSMUST00000155376 150 ntBASIC2.13□□□□□ -2.07
Scn4aQ9ER60 Gm23558-201ENSMUST00000157823 80 ntBASIC2.13□□□□□ -2.07
Scn4aQ9ER60 Gm15914-201ENSMUST00000161922 309 ntBASIC2.13□□□□□ -2.07
Scn4aQ9ER60 Gm18416-201ENSMUST00000175635 1003 ntBASIC2.13□□□□□ -2.07
Scn4aQ9ER60 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC2.13□□□□□ -2.07
Scn4aQ9ER60 Gm22851-201ENSMUST00000178741 94 ntBASIC2.13□□□□□ -2.07
Scn4aQ9ER60 Gm25074-201ENSMUST00000178782 94 ntBASIC2.13□□□□□ -2.07
Scn4aQ9ER60 Gm44462-201ENSMUST00000199696 129 ntBASIC2.13□□□□□ -2.07
Scn4aQ9ER60 AC153957.1-201ENSMUST00000215235 229 ntBASIC2.13□□□□□ -2.07
Scn4aQ9ER60 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Scn4aQ9ER60 Gm25199-201ENSMUST00000083095 104 ntBASIC2.13□□□□□ -2.07
Scn4aQ9ER60 Gm26126-201ENSMUST00000083188 164 ntBASIC2.13□□□□□ -2.07
Scn4aQ9ER60 Gm24280-201ENSMUST00000104237 134 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm13714-201ENSMUST00000117313 221 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm13355-201ENSMUST00000117996 317 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm14629-201ENSMUST00000122428 144 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Mir1942-201ENSMUST00000157274 63 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm25339-201ENSMUST00000157458 232 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm24439-201ENSMUST00000157894 117 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm22527-201ENSMUST00000158816 106 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm11392-201ENSMUST00000181419 710 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm29516-201ENSMUST00000190402 468 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm28951-201ENSMUST00000190742 313 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm32033-201ENSMUST00000193483 339 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm37029-201ENSMUST00000195773 239 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm44024-201ENSMUST00000203008 476 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm44923-201ENSMUST00000206673 85 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm7692-201ENSMUST00000213534 409 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 AC158521.1-201ENSMUST00000225295 660 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 AC117656.1-201ENSMUST00000225826 339 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm26327-201ENSMUST00000093724 111 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm11065-201ENSMUST00000111462 228 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm23352-201ENSMUST00000158428 64 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm24878-201ENSMUST00000158782 104 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm24264-201ENSMUST00000179835 94 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm29352-201ENSMUST00000188054 544 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm18296-201ENSMUST00000192475 783 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 AC162387.1-201ENSMUST00000213369 213 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 AC116589.7-201ENSMUST00000221061 239 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 AC164117.1-201ENSMUST00000221726 239 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm26166-201ENSMUST00000083788 107 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 Gm381-201ENSMUST00000117443 2037 ntBASIC2.12□□□□□ -2.07
Scn4aQ9ER60 AC124426.1-203ENSMUST00000221814 1362 ntBASIC2.11□□□□□ -2.07
Scn4aQ9ER60 Gm26384-201ENSMUST00000102183 110 ntBASIC2.11□□□□□ -2.07
Scn4aQ9ER60 Gm24126-201ENSMUST00000104111 106 ntBASIC2.11□□□□□ -2.07
Scn4aQ9ER60 Gm6182-201ENSMUST00000156439 1208 ntBASIC2.11□□□□□ -2.07
Scn4aQ9ER60 Gm24908-201ENSMUST00000157294 127 ntBASIC2.11□□□□□ -2.07
Scn4aQ9ER60 Gm23933-201ENSMUST00000178405 79 ntBASIC2.11□□□□□ -2.07
Scn4aQ9ER60 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC2.11□□□□□ -2.07
Scn4aQ9ER60 Gm27660-201ENSMUST00000184028 208 ntBASIC2.11□□□□□ -2.07
Scn4aQ9ER60 Gm27490-201ENSMUST00000184754 128 ntBASIC2.11□□□□□ -2.07
Scn4aQ9ER60 Gm28825-201ENSMUST00000186233 238 ntBASIC2.11□□□□□ -2.07
Scn4aQ9ER60 AC156790.3-201ENSMUST00000226200 254 ntBASIC2.11□□□□□ -2.07
Scn4aQ9ER60 Gm24252-201ENSMUST00000083700 132 ntBASIC2.11□□□□□ -2.07
Scn4aQ9ER60 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.11□□□□□ -2.07
Scn4aQ9ER60 Gm12934-201ENSMUST00000119221 343 ntBASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Gm23476-201ENSMUST00000158881 274 ntBASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Ighv1-32-201ENSMUST00000195149 351 ntBASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Gm43245-201ENSMUST00000197603 468 ntBASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Gm24150-201ENSMUST00000082759 104 ntBASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Gm22974-201ENSMUST00000083301 103 ntBASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Snord38a-201ENSMUST00000083746 71 ntBASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms