Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.28□□□□□ -2.36
Cpsf1Q9EPU4 AC122887.2-201ENSMUST00000219465 1603 ntBASIC0.28□□□□□ -2.36
Cpsf1Q9EPU4 Gm36989-201ENSMUST00000193225 2160 ntBASIC0.28□□□□□ -2.36
Cpsf1Q9EPU4 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.28□□□□□ -2.37
Cpsf1Q9EPU4 Gm24808-201ENSMUST00000157993 118 ntBASIC0.28□□□□□ -2.37
Cpsf1Q9EPU4 Gm26038-201ENSMUST00000158151 106 ntBASIC0.28□□□□□ -2.37
Cpsf1Q9EPU4 Gm22522-201ENSMUST00000158271 151 ntBASIC0.28□□□□□ -2.37
Cpsf1Q9EPU4 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.28□□□□□ -2.37
Cpsf1Q9EPU4 Gm45439-201ENSMUST00000211723 359 ntBASIC0.28□□□□□ -2.37
Cpsf1Q9EPU4 Gm25792-201ENSMUST00000083289 100 ntBASIC0.28□□□□□ -2.37
Cpsf1Q9EPU4 Mir429-201ENSMUST00000083493 83 ntBASIC0.28□□□□□ -2.37
Cpsf1Q9EPU4 Mir695-201ENSMUST00000102261 109 ntBASIC0.27□□□□□ -2.37
Cpsf1Q9EPU4 Gm14129-201ENSMUST00000122436 291 ntBASIC0.27□□□□□ -2.37
Cpsf1Q9EPU4 Gm16354-201ENSMUST00000155376 150 ntBASIC0.27□□□□□ -2.37
Cpsf1Q9EPU4 Gm21809-201ENSMUST00000178495 468 ntBASIC0.27□□□□□ -2.37
Cpsf1Q9EPU4 Gm28688-201ENSMUST00000187301 268 ntBASIC0.27□□□□□ -2.37
Cpsf1Q9EPU4 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC0.27□□□□□ -2.37
Cpsf1Q9EPU4 Gm43531-201ENSMUST00000200676 1114 ntBASIC0.27□□□□□ -2.37
Cpsf1Q9EPU4 Gm43894-201ENSMUST00000203274 688 ntBASIC0.27□□□□□ -2.37
Cpsf1Q9EPU4 Gm44041-201ENSMUST00000203678 396 ntBASIC0.27□□□□□ -2.37
Cpsf1Q9EPU4 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC0.27□□□□□ -2.37
Cpsf1Q9EPU4 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
Cpsf1Q9EPU4 Gm22299-201ENSMUST00000082663 136 ntBASIC0.27□□□□□ -2.37
Cpsf1Q9EPU4 Mir362-201ENSMUST00000093592 65 ntBASIC0.27□□□□□ -2.37
Cpsf1Q9EPU4 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC0.26□□□□□ -2.37
Cpsf1Q9EPU4 Gm12053-201ENSMUST00000119022 252 ntBASIC0.26□□□□□ -2.37
Cpsf1Q9EPU4 Gm25666-201ENSMUST00000157702 107 ntBASIC0.26□□□□□ -2.37
Cpsf1Q9EPU4 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
Cpsf1Q9EPU4 Gm29011-201ENSMUST00000191059 712 ntBASIC0.26□□□□□ -2.37
Cpsf1Q9EPU4 AL929285.1-201ENSMUST00000215522 229 ntBASIC0.26□□□□□ -2.37
Cpsf1Q9EPU4 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.26□□□□□ -2.37
Cpsf1Q9EPU4 AC134917.1-201ENSMUST00000220517 1449 ntBASIC0.26□□□□□ -2.37
Cpsf1Q9EPU4 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Cpsf1Q9EPU4 Gm15211-201ENSMUST00000118932 528 ntBASIC0.25□□□□□ -2.37
Cpsf1Q9EPU4 Gm24419-201ENSMUST00000157875 332 ntBASIC0.25□□□□□ -2.37
Cpsf1Q9EPU4 AC154851.2-201ENSMUST00000222172 644 ntBASIC0.25□□□□□ -2.37
Cpsf1Q9EPU4 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.25□□□□□ -2.37
Cpsf1Q9EPU4 AC154252.1-201ENSMUST00000226041 473 ntBASIC0.25□□□□□ -2.37
Cpsf1Q9EPU4 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC0.25□□□□□ -2.37
Cpsf1Q9EPU4 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Cpsf1Q9EPU4 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.25□□□□□ -2.37
Cpsf1Q9EPU4 Traj35-201ENSMUST00000103706 65 ntAPPRIS P1 BASIC0.24□□□□□ -2.37
Cpsf1Q9EPU4 Gm23203-201ENSMUST00000104374 107 ntBASIC0.24□□□□□ -2.37
Cpsf1Q9EPU4 Gm12825-201ENSMUST00000120249 563 ntBASIC0.24□□□□□ -2.37
Cpsf1Q9EPU4 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC0.24□□□□□ -2.37
Cpsf1Q9EPU4 Gm23381-201ENSMUST00000157676 94 ntBASIC0.24□□□□□ -2.37
Cpsf1Q9EPU4 Gm22338-201ENSMUST00000157715 129 ntBASIC0.24□□□□□ -2.37
Cpsf1Q9EPU4 Gm24903-201ENSMUST00000158131 126 ntBASIC0.24□□□□□ -2.37
Cpsf1Q9EPU4 Mir6372-201ENSMUST00000185114 109 ntBASIC0.24□□□□□ -2.37
Cpsf1Q9EPU4 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.24□□□□□ -2.37
Cpsf1Q9EPU4 Olfr1430-ps1-201ENSMUST00000207422 917 ntBASIC0.24□□□□□ -2.37
Cpsf1Q9EPU4 Olfr1486-ps1-201ENSMUST00000208835 220 ntBASIC0.24□□□□□ -2.37
Cpsf1Q9EPU4 Gm40810-201ENSMUST00000219149 253 ntBASIC0.24□□□□□ -2.37
Cpsf1Q9EPU4 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.24□□□□□ -2.37
Cpsf1Q9EPU4 Gm23246-201ENSMUST00000083371 67 ntBASIC0.24□□□□□ -2.37
Cpsf1Q9EPU4 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC0.24□□□□□ -2.37
Cpsf1Q9EPU4 Gm22785-201ENSMUST00000104087 132 ntBASIC0.23□□□□□ -2.37
Cpsf1Q9EPU4 Gm25110-201ENSMUST00000116684 121 ntBASIC0.23□□□□□ -2.37
Cpsf1Q9EPU4 Gm25775-201ENSMUST00000116716 121 ntBASIC0.23□□□□□ -2.37
Cpsf1Q9EPU4 Gm24795-201ENSMUST00000116737 121 ntBASIC0.23□□□□□ -2.37
Cpsf1Q9EPU4 Gm25171-201ENSMUST00000116926 121 ntBASIC0.23□□□□□ -2.37
Cpsf1Q9EPU4 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
Cpsf1Q9EPU4 Gm22527-201ENSMUST00000158816 106 ntBASIC0.23□□□□□ -2.37
Cpsf1Q9EPU4 Gm42516-201ENSMUST00000198691 767 ntBASIC0.23□□□□□ -2.37
Cpsf1Q9EPU4 Gm44211-201ENSMUST00000204867 145 ntBASIC0.23□□□□□ -2.37
Cpsf1Q9EPU4 AC073947.3-201ENSMUST00000215576 766 ntBASIC0.23□□□□□ -2.37
Cpsf1Q9EPU4 Mir544-201ENSMUST00000103813 78 ntBASIC0.22□□□□□ -2.37
Cpsf1Q9EPU4 Gm29490-201ENSMUST00000190923 342 ntBASIC0.22□□□□□ -2.37
Cpsf1Q9EPU4 Gm44524-201ENSMUST00000203899 271 ntBASIC0.22□□□□□ -2.37
Cpsf1Q9EPU4 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC0.22□□□□□ -2.37
Cpsf1Q9EPU4 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.22□□□□□ -2.37
Cpsf1Q9EPU4 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm26484-201ENSMUST00000158018 106 ntBASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm23761-201ENSMUST00000158347 104 ntBASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Mir6364-201ENSMUST00000183396 86 ntBASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm27402-201ENSMUST00000183890 120 ntBASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm29413-201ENSMUST00000186019 880 ntBASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm29134-201ENSMUST00000186579 126 ntBASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm29639-201ENSMUST00000188375 580 ntBASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm28337-201ENSMUST00000190425 666 ntBASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm31123-201ENSMUST00000192094 666 ntBASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm42739-201ENSMUST00000200687 226 ntBASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 AC147240.1-201ENSMUST00000218767 431 ntBASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm13131-201ENSMUST00000122228 321 ntBASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm22075-201ENSMUST00000158599 192 ntBASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm25491-201ENSMUST00000158733 308 ntBASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Mir6904-201ENSMUST00000183443 67 ntBASIC0.21□□□□□ -2.38
Cpsf1Q9EPU4 Gm18039-201ENSMUST00000217816 728 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 224 ms