Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.92□□□□□ -1.78
Upf1Q9EPU0 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.92□□□□□ -1.78
Upf1Q9EPU0 Gm22507-201ENSMUST00000082773 160 ntBASIC3.92□□□□□ -1.78
Upf1Q9EPU0 Gm24356-201ENSMUST00000082859 106 ntBASIC3.92□□□□□ -1.78
Upf1Q9EPU0 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
Upf1Q9EPU0 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
Upf1Q9EPU0 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Upf1Q9EPU0 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Upf1Q9EPU0 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Upf1Q9EPU0 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.91□□□□□ -1.78
Upf1Q9EPU0 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Upf1Q9EPU0 Gm23886-201ENSMUST00000122684 313 ntBASIC3.91□□□□□ -1.78
Upf1Q9EPU0 Gm26287-201ENSMUST00000158887 81 ntBASIC3.91□□□□□ -1.78
Upf1Q9EPU0 Gm24976-201ENSMUST00000158972 135 ntBASIC3.91□□□□□ -1.78
Upf1Q9EPU0 Gm22259-201ENSMUST00000178926 107 ntBASIC3.91□□□□□ -1.78
Upf1Q9EPU0 Mir6336-201ENSMUST00000183581 130 ntBASIC3.91□□□□□ -1.78
Upf1Q9EPU0 Gm27803-201ENSMUST00000183763 119 ntBASIC3.91□□□□□ -1.78
Upf1Q9EPU0 Gm27796-201ENSMUST00000183863 261 ntBASIC3.91□□□□□ -1.78
Upf1Q9EPU0 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.91□□□□□ -1.78
Upf1Q9EPU0 Gm18617-201ENSMUST00000222311 259 ntBASIC3.91□□□□□ -1.78
Upf1Q9EPU0 CT954323.1-201ENSMUST00000222774 229 ntBASIC3.91□□□□□ -1.78
Upf1Q9EPU0 CT025579.1-201ENSMUST00000223779 366 ntBASIC3.91□□□□□ -1.78
Upf1Q9EPU0 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.91□□□□□ -1.78
Upf1Q9EPU0 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Upf1Q9EPU0 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.91□□□□□ -1.78
Upf1Q9EPU0 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Upf1Q9EPU0 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Upf1Q9EPU0 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.9□□□□□ -1.79
Upf1Q9EPU0 Gm15183-201ENSMUST00000118933 348 ntBASIC3.9□□□□□ -1.79
Upf1Q9EPU0 Gm12417-201ENSMUST00000119153 403 ntBASIC3.9□□□□□ -1.79
Upf1Q9EPU0 Gm14770-201ENSMUST00000122197 312 ntBASIC3.9□□□□□ -1.79
Upf1Q9EPU0 Gm14402-201ENSMUST00000122217 508 ntBASIC3.9□□□□□ -1.79
Upf1Q9EPU0 Gm22026-201ENSMUST00000122735 281 ntBASIC3.9□□□□□ -1.79
Upf1Q9EPU0 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Upf1Q9EPU0 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC3.9□□□□□ -1.79
Upf1Q9EPU0 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Upf1Q9EPU0 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC3.9□□□□□ -1.79
Upf1Q9EPU0 Gm22294-201ENSMUST00000083308 104 ntBASIC3.9□□□□□ -1.79
Upf1Q9EPU0 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Upf1Q9EPU0 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Upf1Q9EPU0 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Gm24867-201ENSMUST00000104161 107 ntBASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Gm23841-201ENSMUST00000116951 114 ntBASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Gm15162-201ENSMUST00000119325 283 ntBASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Gm13992-201ENSMUST00000120558 156 ntBASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Gm22651-201ENSMUST00000157872 94 ntBASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Gm22433-201ENSMUST00000158550 142 ntBASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Gm24056-201ENSMUST00000158617 146 ntBASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Gm24816-201ENSMUST00000175311 151 ntBASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Gm18341-201ENSMUST00000197538 622 ntBASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC3.89□□□□□ -1.79
Upf1Q9EPU0 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Upf1Q9EPU0 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Gm15180-201ENSMUST00000117745 492 ntBASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Gm12443-201ENSMUST00000122308 323 ntBASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Gm25543-201ENSMUST00000122678 312 ntBASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Gm22027-201ENSMUST00000122737 127 ntBASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Gm24061-201ENSMUST00000157489 120 ntBASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Gm22911-201ENSMUST00000177920 107 ntBASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Gm27421-201ENSMUST00000184729 167 ntBASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Mir465d-201ENSMUST00000196314 58 ntBASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Gm19366-201ENSMUST00000206996 156 ntBASIC3.88□□□□□ -1.79
Upf1Q9EPU0 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Gm26225-201ENSMUST00000082508 135 ntBASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Gm37498-201ENSMUST00000193524 4002 ntBASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.88□□□□□ -1.79
Upf1Q9EPU0 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
Upf1Q9EPU0 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Upf1Q9EPU0 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Upf1Q9EPU0 Gm23988-201ENSMUST00000117034 122 ntBASIC3.87□□□□□ -1.79
Upf1Q9EPU0 Gm14782-201ENSMUST00000120151 195 ntBASIC3.87□□□□□ -1.79
Upf1Q9EPU0 Gm25269-201ENSMUST00000122601 104 ntBASIC3.87□□□□□ -1.79
Upf1Q9EPU0 Gm22321-201ENSMUST00000157152 104 ntBASIC3.87□□□□□ -1.79
Upf1Q9EPU0 Gm20660-201ENSMUST00000177515 289 ntBASIC3.87□□□□□ -1.79
Upf1Q9EPU0 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC3.87□□□□□ -1.79
Upf1Q9EPU0 Gm44526-201ENSMUST00000204664 121 ntBASIC3.87□□□□□ -1.79
Upf1Q9EPU0 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Upf1Q9EPU0 Gm10298-201ENSMUST00000074801 265 ntBASIC3.87□□□□□ -1.79
Upf1Q9EPU0 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Upf1Q9EPU0 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Upf1Q9EPU0 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.87□□□□□ -1.79
Upf1Q9EPU0 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Upf1Q9EPU0 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms