Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm25475-201ENSMUST00000082825 180 ntBASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Gm23377-201ENSMUST00000082943 126 ntBASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Gm26265-201ENSMUST00000083277 135 ntBASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Cdc40Q9DC48 Gm14823-201ENSMUST00000117698 238 ntBASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Gm12304-201ENSMUST00000120312 385 ntBASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Gm23000-201ENSMUST00000157083 139 ntBASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Gm26102-201ENSMUST00000157251 284 ntBASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Mir28b-201ENSMUST00000175399 80 ntBASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Gm24572-201ENSMUST00000175505 88 ntBASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Gm24638-201ENSMUST00000179807 132 ntBASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Gm27588-201ENSMUST00000185096 263 ntBASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Trbv22-201ENSMUST00000191697 291 ntBASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Gm32175-201ENSMUST00000193641 346 ntBASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Gm17990-201ENSMUST00000211728 553 ntBASIC1.63□□□□□ -2.15
Cdc40Q9DC48 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.63□□□□□ -2.15
Cdc40Q9DC48 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.63□□□□□ -2.15
Cdc40Q9DC48 CT030687.1-201ENSMUST00000221854 162 ntBASIC1.63□□□□□ -2.15
Cdc40Q9DC48 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
Cdc40Q9DC48 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Cdc40Q9DC48 Mir301b-201ENSMUST00000102333 97 ntBASIC1.62□□□□□ -2.15
Cdc40Q9DC48 Gm14674-201ENSMUST00000117816 342 ntBASIC1.62□□□□□ -2.15
Cdc40Q9DC48 Gm14551-201ENSMUST00000120802 256 ntBASIC1.62□□□□□ -2.15
Cdc40Q9DC48 Gm23172-201ENSMUST00000157160 124 ntBASIC1.62□□□□□ -2.15
Cdc40Q9DC48 Gm22665-201ENSMUST00000158720 275 ntBASIC1.62□□□□□ -2.15
Cdc40Q9DC48 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Cdc40Q9DC48 Gm23862-201ENSMUST00000180342 94 ntBASIC1.62□□□□□ -2.15
Cdc40Q9DC48 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Cdc40Q9DC48 Gm29657-201ENSMUST00000189807 342 ntBASIC1.62□□□□□ -2.15
Cdc40Q9DC48 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Cdc40Q9DC48 AC134334.1-201ENSMUST00000214277 255 ntBASIC1.62□□□□□ -2.15
Cdc40Q9DC48 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC1.62□□□□□ -2.15
Cdc40Q9DC48 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.62□□□□□ -2.15
Cdc40Q9DC48 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.62□□□□□ -2.15
Cdc40Q9DC48 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.62□□□□□ -2.15
Cdc40Q9DC48 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
Cdc40Q9DC48 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Cdc40Q9DC48 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Gm25876-201ENSMUST00000104329 119 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Mir743b-201ENSMUST00000104751 77 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Gm5396-201ENSMUST00000121222 532 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Gm13409-201ENSMUST00000122072 546 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Gm25279-201ENSMUST00000122608 133 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Gm25012-201ENSMUST00000158396 164 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Gm5277-201ENSMUST00000164923 556 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Gm7953-201ENSMUST00000168278 469 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Mir3086-201ENSMUST00000175072 87 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Gm24573-201ENSMUST00000175499 112 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Gm24418-201ENSMUST00000177597 79 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Gm24639-201ENSMUST00000178518 79 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Gm23076-201ENSMUST00000179082 79 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Gm25077-201ENSMUST00000179157 79 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Mir6905-201ENSMUST00000184228 70 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Gm18775-201ENSMUST00000190763 586 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Gm43556-201ENSMUST00000196186 681 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Gm42509-201ENSMUST00000197390 781 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 AC124542.1-201ENSMUST00000205588 908 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 AC102352.1-201ENSMUST00000224187 582 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Mir452-201ENSMUST00000093629 85 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.61□□□□□ -2.15
Cdc40Q9DC48 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Cdc40Q9DC48 Gm7916-201ENSMUST00000120325 456 ntBASIC1.6□□□□□ -2.15
Cdc40Q9DC48 Gm23212-201ENSMUST00000122718 60 ntBASIC1.6□□□□□ -2.15
Cdc40Q9DC48 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC1.6□□□□□ -2.15
Cdc40Q9DC48 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Cdc40Q9DC48 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.6□□□□□ -2.15
Cdc40Q9DC48 Gm23829-201ENSMUST00000157392 270 ntBASIC1.6□□□□□ -2.15
Cdc40Q9DC48 Gm22843-201ENSMUST00000157710 134 ntBASIC1.6□□□□□ -2.15
Cdc40Q9DC48 Gm25457-201ENSMUST00000179509 107 ntBASIC1.6□□□□□ -2.15
Cdc40Q9DC48 Gm18356-201ENSMUST00000185677 623 ntBASIC1.6□□□□□ -2.15
Cdc40Q9DC48 Gm37162-201ENSMUST00000191708 551 ntBASIC1.6□□□□□ -2.15
Cdc40Q9DC48 Gm37361-201ENSMUST00000194345 132 ntBASIC1.6□□□□□ -2.15
Cdc40Q9DC48 Gm43431-201ENSMUST00000198577 340 ntBASIC1.6□□□□□ -2.15
Cdc40Q9DC48 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.6□□□□□ -2.15
Cdc40Q9DC48 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.6□□□□□ -2.15
Cdc40Q9DC48 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.6□□□□□ -2.15
Cdc40Q9DC48 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.6□□□□□ -2.15
Cdc40Q9DC48 AC156790.3-201ENSMUST00000226200 254 ntBASIC1.6□□□□□ -2.15
Cdc40Q9DC48 AC122393.1-201ENSMUST00000226570 319 ntBASIC1.6□□□□□ -2.15
Cdc40Q9DC48 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Cdc40Q9DC48 Gm24805-201ENSMUST00000082931 104 ntBASIC1.6□□□□□ -2.15
Cdc40Q9DC48 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Gm26384-201ENSMUST00000102183 110 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 126.9 ms