Protein–RNA interactions for Protein: Q9D706

Rpap3, RNA polymerase II-associated protein 3, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap3Q9D706 Snora36b-201ENSMUST00000104383 132 ntBASIC2.54□□□□□ -2
Rpap3Q9D706 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Rpap3Q9D706 Gm14530-201ENSMUST00000122391 333 ntBASIC2.54□□□□□ -2
Rpap3Q9D706 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.54□□□□□ -2
Rpap3Q9D706 Gm23033-201ENSMUST00000157996 134 ntBASIC2.54□□□□□ -2
Rpap3Q9D706 Gm25711-201ENSMUST00000158633 128 ntBASIC2.54□□□□□ -2
Rpap3Q9D706 Gm16561-201ENSMUST00000163001 192 ntBASIC2.54□□□□□ -2
Rpap3Q9D706 Gm26501-201ENSMUST00000178307 107 ntBASIC2.54□□□□□ -2
Rpap3Q9D706 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.54□□□□□ -2
Rpap3Q9D706 Gm9227-201ENSMUST00000194733 566 ntBASIC2.54□□□□□ -2
Rpap3Q9D706 Mir497-201ENSMUST00000200557 84 ntBASIC2.54□□□□□ -2
Rpap3Q9D706 Gm45402-201ENSMUST00000211796 223 ntBASIC2.54□□□□□ -2
Rpap3Q9D706 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Rpap3Q9D706 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.54□□□□□ -2
Rpap3Q9D706 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.54□□□□□ -2
Rpap3Q9D706 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.53□□□□□ -2
Rpap3Q9D706 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC2.53□□□□□ -2
Rpap3Q9D706 Mir344e-201ENSMUST00000104677 66 ntBASIC2.53□□□□□ -2
Rpap3Q9D706 Gm14670-201ENSMUST00000117327 337 ntBASIC2.53□□□□□ -2
Rpap3Q9D706 Gm12956-201ENSMUST00000122184 414 ntBASIC2.53□□□□□ -2
Rpap3Q9D706 Gm27510-201ENSMUST00000158214 64 ntBASIC2.53□□□□□ -2
Rpap3Q9D706 Gm22666-201ENSMUST00000158717 164 ntBASIC2.53□□□□□ -2
Rpap3Q9D706 Gm17148-201ENSMUST00000164702 249 ntBASIC2.53□□□□□ -2
Rpap3Q9D706 Gm25314-201ENSMUST00000178810 79 ntBASIC2.53□□□□□ -2
Rpap3Q9D706 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Rpap3Q9D706 Mir6355-201ENSMUST00000183687 106 ntBASIC2.53□□□□□ -2
Rpap3Q9D706 Gm27991-201ENSMUST00000184804 137 ntBASIC2.53□□□□□ -2
Rpap3Q9D706 Gm45730-201ENSMUST00000212560 395 ntBASIC2.53□□□□□ -2
Rpap3Q9D706 Gm8125-201ENSMUST00000216602 738 ntBASIC2.53□□□□□ -2
Rpap3Q9D706 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.53□□□□□ -2
Rpap3Q9D706 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.53□□□□□ -2
Rpap3Q9D706 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Rpap3Q9D706 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Rpap3Q9D706 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
Rpap3Q9D706 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
Rpap3Q9D706 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.53□□□□□ -2.01
Rpap3Q9D706 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.52□□□□□ -2.01
Rpap3Q9D706 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Rpap3Q9D706 Gm25094-201ENSMUST00000103992 131 ntBASIC2.52□□□□□ -2.01
Rpap3Q9D706 Gm15443-201ENSMUST00000118947 820 ntBASIC2.52□□□□□ -2.01
Rpap3Q9D706 Gm25625-201ENSMUST00000157221 96 ntBASIC2.52□□□□□ -2.01
Rpap3Q9D706 Gm22664-201ENSMUST00000158719 105 ntBASIC2.52□□□□□ -2.01
Rpap3Q9D706 Gm8292-201ENSMUST00000162574 396 ntBASIC2.52□□□□□ -2.01
Rpap3Q9D706 Gm25996-201ENSMUST00000175393 117 ntBASIC2.52□□□□□ -2.01
Rpap3Q9D706 Gm25457-201ENSMUST00000179509 107 ntBASIC2.52□□□□□ -2.01
Rpap3Q9D706 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.52□□□□□ -2.01
Rpap3Q9D706 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.52□□□□□ -2.01
Rpap3Q9D706 AC162857.1-201ENSMUST00000226614 400 ntBASIC2.52□□□□□ -2.01
Rpap3Q9D706 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.52□□□□□ -2.01
Rpap3Q9D706 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.52□□□□□ -2.01
Rpap3Q9D706 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.52□□□□□ -2.01
Rpap3Q9D706 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.52□□□□□ -2.01
Rpap3Q9D706 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.51□□□□□ -2.01
Rpap3Q9D706 Gm24338-201ENSMUST00000104205 127 ntBASIC2.51□□□□□ -2.01
Rpap3Q9D706 Gm22678-201ENSMUST00000116974 101 ntBASIC2.51□□□□□ -2.01
Rpap3Q9D706 Gm13672-201ENSMUST00000117554 459 ntBASIC2.51□□□□□ -2.01
Rpap3Q9D706 Gm11386-201ENSMUST00000117761 347 ntBASIC2.51□□□□□ -2.01
Rpap3Q9D706 Gm15536-201ENSMUST00000121411 114 ntBASIC2.51□□□□□ -2.01
Rpap3Q9D706 Gm22654-201ENSMUST00000157874 105 ntBASIC2.51□□□□□ -2.01
Rpap3Q9D706 Gm23016-201ENSMUST00000158431 62 ntBASIC2.51□□□□□ -2.01
Rpap3Q9D706 Gm24577-201ENSMUST00000158580 63 ntBASIC2.51□□□□□ -2.01
Rpap3Q9D706 Gm27959-201ENSMUST00000185172 111 ntBASIC2.51□□□□□ -2.01
Rpap3Q9D706 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.51□□□□□ -2.01
Rpap3Q9D706 Gm44726-201ENSMUST00000203427 217 ntBASIC2.51□□□□□ -2.01
Rpap3Q9D706 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.51□□□□□ -2.01
Rpap3Q9D706 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC2.51□□□□□ -2.01
Rpap3Q9D706 Gm44794-201ENSMUST00000206550 411 ntBASIC2.51□□□□□ -2.01
Rpap3Q9D706 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.51□□□□□ -2.01
Rpap3Q9D706 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.51□□□□□ -2.01
Rpap3Q9D706 Gm40810-201ENSMUST00000219149 253 ntBASIC2.51□□□□□ -2.01
Rpap3Q9D706 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Rpap3Q9D706 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.51□□□□□ -2.01
Rpap3Q9D706 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.51□□□□□ -2.01
Rpap3Q9D706 Gm23462-201ENSMUST00000083264 104 ntBASIC2.51□□□□□ -2.01
Rpap3Q9D706 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.5□□□□□ -2.01
Rpap3Q9D706 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
Rpap3Q9D706 Gm26154-201ENSMUST00000102339 96 ntBASIC2.5□□□□□ -2.01
Rpap3Q9D706 Gm24172-201ENSMUST00000104127 117 ntBASIC2.5□□□□□ -2.01
Rpap3Q9D706 Gm15010-201ENSMUST00000117153 407 ntBASIC2.5□□□□□ -2.01
Rpap3Q9D706 Gm13885-201ENSMUST00000117569 187 ntBASIC2.5□□□□□ -2.01
Rpap3Q9D706 Gm14748-201ENSMUST00000119819 411 ntBASIC2.5□□□□□ -2.01
Rpap3Q9D706 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.5□□□□□ -2.01
Rpap3Q9D706 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.5□□□□□ -2.01
Rpap3Q9D706 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.5□□□□□ -2.01
Rpap3Q9D706 Gm23980-201ENSMUST00000157135 158 ntBASIC2.5□□□□□ -2.01
Rpap3Q9D706 Gm25392-201ENSMUST00000157335 297 ntBASIC2.5□□□□□ -2.01
Rpap3Q9D706 Gm23324-201ENSMUST00000157421 131 ntBASIC2.5□□□□□ -2.01
Rpap3Q9D706 Gm22554-201ENSMUST00000157798 147 ntBASIC2.5□□□□□ -2.01
Rpap3Q9D706 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.5□□□□□ -2.01
Rpap3Q9D706 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.5□□□□□ -2.01
Rpap3Q9D706 Gm24388-201ENSMUST00000177872 107 ntBASIC2.5□□□□□ -2.01
Rpap3Q9D706 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Rpap3Q9D706 Gm37923-201ENSMUST00000191624 161 ntBASIC2.5□□□□□ -2.01
Rpap3Q9D706 Gm37557-201ENSMUST00000191640 139 ntBASIC2.5□□□□□ -2.01
Rpap3Q9D706 Gm45315-201ENSMUST00000209283 333 ntBASIC2.5□□□□□ -2.01
Rpap3Q9D706 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.5□□□□□ -2.01
Rpap3Q9D706 CT025526.1-201ENSMUST00000217327 267 ntBASIC2.5□□□□□ -2.01
Rpap3Q9D706 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Rpap3Q9D706 Gm26066-201ENSMUST00000083385 109 ntBASIC2.5□□□□□ -2.01
Rpap3Q9D706 Gm25651-201ENSMUST00000083782 119 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 125.5 ms