Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm42509-201ENSMUST00000197390 781 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm44564-201ENSMUST00000207985 180 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Ccdc3Q9D6Y1 Gm25992-201ENSMUST00000102437 109 ntBASIC1.36□□□□□ -2.19
Ccdc3Q9D6Y1 Gm22673-201ENSMUST00000104415 131 ntBASIC1.36□□□□□ -2.19
Ccdc3Q9D6Y1 Gm12636-201ENSMUST00000117395 624 ntBASIC1.36□□□□□ -2.19
Ccdc3Q9D6Y1 Gm12372-201ENSMUST00000121654 768 ntBASIC1.36□□□□□ -2.19
Ccdc3Q9D6Y1 Gm24262-201ENSMUST00000157431 144 ntBASIC1.36□□□□□ -2.19
Ccdc3Q9D6Y1 Gm25557-201ENSMUST00000158084 315 ntBASIC1.36□□□□□ -2.19
Ccdc3Q9D6Y1 Gm15914-201ENSMUST00000161922 309 ntBASIC1.36□□□□□ -2.19
Ccdc3Q9D6Y1 Gm24333-201ENSMUST00000175101 84 ntBASIC1.36□□□□□ -2.19
Ccdc3Q9D6Y1 Gm24154-201ENSMUST00000175261 130 ntBASIC1.36□□□□□ -2.19
Ccdc3Q9D6Y1 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC1.36□□□□□ -2.19
Ccdc3Q9D6Y1 Mir8119-201ENSMUST00000183371 129 ntBASIC1.36□□□□□ -2.19
Ccdc3Q9D6Y1 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC1.36□□□□□ -2.19
Ccdc3Q9D6Y1 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.36□□□□□ -2.19
Ccdc3Q9D6Y1 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
Ccdc3Q9D6Y1 Gm24805-201ENSMUST00000082931 104 ntBASIC1.36□□□□□ -2.19
Ccdc3Q9D6Y1 Mir452-201ENSMUST00000093629 85 ntBASIC1.36□□□□□ -2.19
Ccdc3Q9D6Y1 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.36□□□□□ -2.19
Ccdc3Q9D6Y1 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.36□□□□□ -2.19
Ccdc3Q9D6Y1 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.36□□□□□ -2.19
Ccdc3Q9D6Y1 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 Gm15807-201ENSMUST00000119880 1128 ntBASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 Gm15719-201ENSMUST00000120619 635 ntBASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 Defa-ps8-201ENSMUST00000120972 279 ntBASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 Gm13356-201ENSMUST00000121678 335 ntBASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 Gm23329-201ENSMUST00000157415 108 ntBASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 Gm24348-201ENSMUST00000158710 130 ntBASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 Mir7052-201ENSMUST00000184821 65 ntBASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 Gm28404-201ENSMUST00000190242 453 ntBASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 Gm29950-201ENSMUST00000195273 237 ntBASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 Gm42925-201ENSMUST00000197359 285 ntBASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 Gm29848-201ENSMUST00000203107 295 ntBASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 Gm19032-201ENSMUST00000208584 592 ntBASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 AC101677.1-201ENSMUST00000218590 158 ntBASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 CT009733.1-203ENSMUST00000224033 451 ntBASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 AC164629.4-201ENSMUST00000218505 3247 ntBASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Ccdc3Q9D6Y1 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm24430-201ENSMUST00000104077 104 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm14007-201ENSMUST00000118288 210 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm14887-201ENSMUST00000119522 663 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm11359-201ENSMUST00000120039 567 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm14551-201ENSMUST00000120802 256 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm14765-201ENSMUST00000121954 326 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm23206-201ENSMUST00000122720 184 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm22082-201ENSMUST00000157587 161 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm24439-201ENSMUST00000157894 117 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm25012-201ENSMUST00000158396 164 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm20543-201ENSMUST00000174200 726 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Snord87-201ENSMUST00000175437 87 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm24573-201ENSMUST00000175499 112 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm23568-201ENSMUST00000177960 92 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm24829-201ENSMUST00000179245 92 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Mir6341-201ENSMUST00000183490 121 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm43510-201ENSMUST00000197922 353 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm17991-201ENSMUST00000208139 297 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm7692-201ENSMUST00000213534 409 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 CT009550.5-201ENSMUST00000226286 382 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm16976-205ENSMUST00000227324 226 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm22062-201ENSMUST00000082563 107 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm22620-201ENSMUST00000082700 133 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Gm26175-201ENSMUST00000083794 131 ntBASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.34□□□□□ -2.19
Ccdc3Q9D6Y1 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
Ccdc3Q9D6Y1 Gm23429-201ENSMUST00000122486 149 ntBASIC1.33□□□□□ -2.2
Ccdc3Q9D6Y1 Gm25784-201ENSMUST00000122524 81 ntBASIC1.33□□□□□ -2.2
Ccdc3Q9D6Y1 Gm22236-201ENSMUST00000157093 106 ntBASIC1.33□□□□□ -2.2
Ccdc3Q9D6Y1 Gm25625-201ENSMUST00000157221 96 ntBASIC1.33□□□□□ -2.2
Ccdc3Q9D6Y1 Gm26102-201ENSMUST00000157251 284 ntBASIC1.33□□□□□ -2.2
Ccdc3Q9D6Y1 Gm25933-201ENSMUST00000178943 108 ntBASIC1.33□□□□□ -2.2
Ccdc3Q9D6Y1 Gm25457-201ENSMUST00000179509 107 ntBASIC1.33□□□□□ -2.2
Ccdc3Q9D6Y1 Gm27028-201ENSMUST00000182303 399 ntBASIC1.33□□□□□ -2.2
Ccdc3Q9D6Y1 Gm29550-201ENSMUST00000185543 285 ntBASIC1.33□□□□□ -2.2
Ccdc3Q9D6Y1 Gm37438-201ENSMUST00000192813 393 ntBASIC1.33□□□□□ -2.2
Ccdc3Q9D6Y1 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Ccdc3Q9D6Y1 AL929265.1-201ENSMUST00000213427 125 ntBASIC1.33□□□□□ -2.2
Ccdc3Q9D6Y1 Gm18703-201ENSMUST00000215318 333 ntBASIC1.33□□□□□ -2.2
Ccdc3Q9D6Y1 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC1.33□□□□□ -2.2
Ccdc3Q9D6Y1 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.33□□□□□ -2.2
Ccdc3Q9D6Y1 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
Ccdc3Q9D6Y1 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 93.1 ms