Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm8292-201ENSMUST00000162574 396 ntBASIC2.55□□□□□ -2
Vps28Q9D1C8 Gm24084-201ENSMUST00000175173 137 ntBASIC2.55□□□□□ -2
Vps28Q9D1C8 Gm24810-201ENSMUST00000175317 70 ntBASIC2.55□□□□□ -2
Vps28Q9D1C8 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.55□□□□□ -2
Vps28Q9D1C8 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.55□□□□□ -2
Vps28Q9D1C8 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.55□□□□□ -2
Vps28Q9D1C8 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.55□□□□□ -2
Vps28Q9D1C8 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.55□□□□□ -2
Vps28Q9D1C8 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.55□□□□□ -2
Vps28Q9D1C8 Gm23246-201ENSMUST00000083371 67 ntBASIC2.55□□□□□ -2
Vps28Q9D1C8 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.55□□□□□ -2
Vps28Q9D1C8 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Vps28Q9D1C8 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Vps28Q9D1C8 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Vps28Q9D1C8 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Vps28Q9D1C8 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.54□□□□□ -2
Vps28Q9D1C8 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.54□□□□□ -2
Vps28Q9D1C8 Gm22534-201ENSMUST00000158173 104 ntBASIC2.54□□□□□ -2
Vps28Q9D1C8 Gm24075-201ENSMUST00000158175 72 ntBASIC2.54□□□□□ -2
Vps28Q9D1C8 Snord11-201ENSMUST00000158468 84 ntBASIC2.54□□□□□ -2
Vps28Q9D1C8 Gm25020-201ENSMUST00000178071 107 ntBASIC2.54□□□□□ -2
Vps28Q9D1C8 Mir6355-201ENSMUST00000183687 106 ntBASIC2.54□□□□□ -2
Vps28Q9D1C8 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.54□□□□□ -2
Vps28Q9D1C8 Gm28900-201ENSMUST00000185232 156 ntBASIC2.54□□□□□ -2
Vps28Q9D1C8 Gm18356-201ENSMUST00000185677 623 ntBASIC2.54□□□□□ -2
Vps28Q9D1C8 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.54□□□□□ -2
Vps28Q9D1C8 Gm37128-201ENSMUST00000192599 232 ntBASIC2.54□□□□□ -2
Vps28Q9D1C8 Trbv18-201ENSMUST00000194256 294 ntBASIC2.54□□□□□ -2
Vps28Q9D1C8 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC2.54□□□□□ -2
Vps28Q9D1C8 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.54□□□□□ -2
Vps28Q9D1C8 Gm18991-201ENSMUST00000209225 746 ntBASIC2.54□□□□□ -2
Vps28Q9D1C8 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.54□□□□□ -2
Vps28Q9D1C8 Gm45815-201ENSMUST00000220241 146 ntBASIC2.54□□□□□ -2
Vps28Q9D1C8 CT485612.2-201ENSMUST00000223014 151 ntBASIC2.54□□□□□ -2
Vps28Q9D1C8 Gm23453-201ENSMUST00000083326 106 ntBASIC2.54□□□□□ -2
Vps28Q9D1C8 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.54□□□□□ -2
Vps28Q9D1C8 Gm26396-201ENSMUST00000104093 132 ntBASIC2.53□□□□□ -2
Vps28Q9D1C8 Mdga2-203ENSMUST00000113942 423 ntBASIC2.53□□□□□ -2
Vps28Q9D1C8 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.53□□□□□ -2
Vps28Q9D1C8 Gm14215-201ENSMUST00000120578 221 ntBASIC2.53□□□□□ -2
Vps28Q9D1C8 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.53□□□□□ -2
Vps28Q9D1C8 Gm23600-201ENSMUST00000157260 71 ntBASIC2.53□□□□□ -2
Vps28Q9D1C8 Gm3027-201ENSMUST00000167579 451 ntBASIC2.53□□□□□ -2
Vps28Q9D1C8 Mir3092-201ENSMUST00000174954 96 ntBASIC2.53□□□□□ -2
Vps28Q9D1C8 Gm21737-201ENSMUST00000178112 664 ntBASIC2.53□□□□□ -2
Vps28Q9D1C8 Gm21815-201ENSMUST00000178213 664 ntBASIC2.53□□□□□ -2
Vps28Q9D1C8 Gm25121-201ENSMUST00000179846 79 ntBASIC2.53□□□□□ -2
Vps28Q9D1C8 Gm20901-201ENSMUST00000180177 664 ntBASIC2.53□□□□□ -2
Vps28Q9D1C8 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC2.53□□□□□ -2
Vps28Q9D1C8 Gm28090-201ENSMUST00000189458 664 ntBASIC2.53□□□□□ -2
Vps28Q9D1C8 Gm21647-201ENSMUST00000189755 664 ntBASIC2.53□□□□□ -2
Vps28Q9D1C8 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.53□□□□□ -2
Vps28Q9D1C8 Mir7215-201ENSMUST00000200383 51 ntBASIC2.53□□□□□ -2
Vps28Q9D1C8 Gm26265-201ENSMUST00000083277 135 ntBASIC2.53□□□□□ -2
Vps28Q9D1C8 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.53□□□□□ -2
Vps28Q9D1C8 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Vps28Q9D1C8 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.52□□□□□ -2.01
Vps28Q9D1C8 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Vps28Q9D1C8 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC2.52□□□□□ -2.01
Vps28Q9D1C8 Gm25625-201ENSMUST00000157221 96 ntBASIC2.52□□□□□ -2.01
Vps28Q9D1C8 Gm24771-201ENSMUST00000158508 137 ntBASIC2.52□□□□□ -2.01
Vps28Q9D1C8 Gm23186-201ENSMUST00000180078 107 ntBASIC2.52□□□□□ -2.01
Vps28Q9D1C8 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Vps28Q9D1C8 Gm28211-201ENSMUST00000190920 315 ntBASIC2.52□□□□□ -2.01
Vps28Q9D1C8 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.52□□□□□ -2.01
Vps28Q9D1C8 Gm43723-201ENSMUST00000196886 189 ntBASIC2.52□□□□□ -2.01
Vps28Q9D1C8 Gm43978-201ENSMUST00000203491 451 ntBASIC2.52□□□□□ -2.01
Vps28Q9D1C8 Gm44182-201ENSMUST00000204052 115 ntBASIC2.52□□□□□ -2.01
Vps28Q9D1C8 AC166358.7-201ENSMUST00000221132 108 ntBASIC2.52□□□□□ -2.01
Vps28Q9D1C8 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Vps28Q9D1C8 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.52□□□□□ -2.01
Vps28Q9D1C8 AC125543.5-201ENSMUST00000222799 108 ntBASIC2.52□□□□□ -2.01
Vps28Q9D1C8 AC159619.2-201ENSMUST00000222924 401 ntBASIC2.52□□□□□ -2.01
Vps28Q9D1C8 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.52□□□□□ -2.01
Vps28Q9D1C8 Gm25896-201ENSMUST00000083713 136 ntBASIC2.52□□□□□ -2.01
Vps28Q9D1C8 Gm25651-201ENSMUST00000083782 119 ntBASIC2.52□□□□□ -2.01
Vps28Q9D1C8 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Gm24049-201ENSMUST00000102409 100 ntBASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Gm24282-201ENSMUST00000104232 66 ntBASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Gm15010-201ENSMUST00000117153 407 ntBASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Gm23980-201ENSMUST00000157135 158 ntBASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Gm25970-201ENSMUST00000157165 86 ntBASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Gm23381-201ENSMUST00000157676 94 ntBASIC2.51□□□□□ -2.01
Vps28Q9D1C8 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Gm24388-201ENSMUST00000177872 107 ntBASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Gm20874-201ENSMUST00000178356 663 ntBASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Gm25457-201ENSMUST00000179509 107 ntBASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Gm26180-201ENSMUST00000179942 107 ntBASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Gm42570-201ENSMUST00000195937 292 ntBASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Gm44161-201ENSMUST00000203532 253 ntBASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Gm45522-201ENSMUST00000210784 166 ntBASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Gm45791-201ENSMUST00000212908 352 ntBASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Gm25801-201ENSMUST00000082638 106 ntBASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Gm23462-201ENSMUST00000083264 104 ntBASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Vps28Q9D1C8 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms