Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm15235-201ENSMUST00000200572 194 ntBASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Gm19118-201ENSMUST00000222554 98 ntBASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 AC100209.2-201ENSMUST00000224461 451 ntBASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Gm25793-201ENSMUST00000083287 107 ntBASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Gm23246-201ENSMUST00000083371 67 ntBASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Mir133a-1-201ENSMUST00000083465 68 ntBASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Gm23851-201ENSMUST00000083831 103 ntBASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ddx56Q9D0R4 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 Gm22479-201ENSMUST00000122566 81 ntBASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 Gm22447-201ENSMUST00000158155 92 ntBASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 Gm26402-201ENSMUST00000158499 113 ntBASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 Gm7592-201ENSMUST00000160674 627 ntBASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 Gm7582-201ENSMUST00000160831 603 ntBASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 Gm22242-201ENSMUST00000175224 118 ntBASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 Gm20651-201ENSMUST00000177219 329 ntBASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 Gm24304-201ENSMUST00000177635 107 ntBASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 Gm29658-201ENSMUST00000185404 230 ntBASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 Igkv4-60-201ENSMUST00000200639 358 ntBASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 AC155712.1-201ENSMUST00000219704 160 ntBASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 Gm22287-201ENSMUST00000083197 107 ntBASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
Ddx56Q9D0R4 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm14564-201ENSMUST00000122159 294 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm22187-201ENSMUST00000157819 129 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm24348-201ENSMUST00000158710 130 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm26200-201ENSMUST00000180273 79 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm29512-201ENSMUST00000185544 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm28110-201ENSMUST00000185782 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm29057-201ENSMUST00000186468 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm29661-201ENSMUST00000186781 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm28737-201ENSMUST00000186808 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm29118-201ENSMUST00000186908 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm28433-201ENSMUST00000187085 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm28759-201ENSMUST00000187621 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm28831-201ENSMUST00000187739 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm28200-201ENSMUST00000187778 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm28752-201ENSMUST00000188340 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm29378-201ENSMUST00000188723 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm28569-201ENSMUST00000188748 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm28120-201ENSMUST00000188812 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm28369-201ENSMUST00000188993 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm29037-201ENSMUST00000189092 313 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm28909-201ENSMUST00000189406 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm28861-201ENSMUST00000189681 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm29180-201ENSMUST00000190003 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm29575-201ENSMUST00000190597 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm29469-201ENSMUST00000191448 315 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Mir184-201ENSMUST00000083662 69 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm23731-201ENSMUST00000083749 107 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.19□□□□□ -1.9
Ddx56Q9D0R4 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 Mir673-201ENSMUST00000102361 91 ntBASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 Gm13432-201ENSMUST00000118861 241 ntBASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 Gm17065-201ENSMUST00000165245 239 ntBASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 Gm25020-201ENSMUST00000178071 107 ntBASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 Gm26928-201ENSMUST00000182674 572 ntBASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 Gm28257-201ENSMUST00000185244 463 ntBASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 Gm28408-201ENSMUST00000191557 463 ntBASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 AC129202.2-201ENSMUST00000225123 177 ntBASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 Gm22062-201ENSMUST00000082563 107 ntBASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 CT030170.3-201ENSMUST00000221205 1815 ntBASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ddx56Q9D0R4 Gm45393-201ENSMUST00000211634 2631 ntBASIC3.17□□□□□ -1.9
Ddx56Q9D0R4 Mir872-201ENSMUST00000104728 81 ntBASIC3.17□□□□□ -1.9
Ddx56Q9D0R4 Gm22151-201ENSMUST00000116963 58 ntBASIC3.17□□□□□ -1.9
Ddx56Q9D0R4 Gm12837-201ENSMUST00000120131 373 ntBASIC3.17□□□□□ -1.9
Ddx56Q9D0R4 Gm25543-201ENSMUST00000122678 312 ntBASIC3.17□□□□□ -1.9
Ddx56Q9D0R4 Gm25397-201ENSMUST00000176951 92 ntBASIC3.17□□□□□ -1.9
Ddx56Q9D0R4 Gm43583-201ENSMUST00000199235 303 ntBASIC3.17□□□□□ -1.9
Ddx56Q9D0R4 Gm44964-201ENSMUST00000207011 273 ntBASIC3.17□□□□□ -1.9
Ddx56Q9D0R4 AC114010.1-201ENSMUST00000222060 379 ntBASIC3.17□□□□□ -1.9
Ddx56Q9D0R4 AC167669.4-201ENSMUST00000225967 140 ntBASIC3.17□□□□□ -1.9
Ddx56Q9D0R4 CT030182.3-201ENSMUST00000225986 582 ntBASIC3.17□□□□□ -1.9
Ddx56Q9D0R4 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms