Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Gm25376-201ENSMUST00000104340 133 ntBASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Gm23987-201ENSMUST00000117039 129 ntBASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Gm14980-201ENSMUST00000121247 736 ntBASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Gm22073-201ENSMUST00000122668 189 ntBASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Gm24291-201ENSMUST00000157633 162 ntBASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Gm22308-201ENSMUST00000177609 107 ntBASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Gm27220-201ENSMUST00000183453 262 ntBASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Gm29229-201ENSMUST00000188874 323 ntBASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Gm42739-201ENSMUST00000200687 226 ntBASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Gm34314-201ENSMUST00000203622 367 ntBASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Gm44881-201ENSMUST00000205425 367 ntBASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Gm45678-201ENSMUST00000210509 295 ntBASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Gm22997-201ENSMUST00000082845 107 ntBASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.41□□□□□ -2.02
Ddx28Q9CWT6 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.4□□□□□ -2.02
Ddx28Q9CWT6 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.4□□□□□ -2.03
Ddx28Q9CWT6 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Ddx28Q9CWT6 Gm24338-201ENSMUST00000104205 127 ntBASIC2.4□□□□□ -2.03
Ddx28Q9CWT6 Gm22032-201ENSMUST00000116946 116 ntBASIC2.4□□□□□ -2.03
Ddx28Q9CWT6 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.4□□□□□ -2.03
Ddx28Q9CWT6 Gm25054-201ENSMUST00000157370 97 ntBASIC2.4□□□□□ -2.03
Ddx28Q9CWT6 Gm25982-201ENSMUST00000157920 101 ntBASIC2.4□□□□□ -2.03
Ddx28Q9CWT6 Gm22947-201ENSMUST00000158559 91 ntBASIC2.4□□□□□ -2.03
Ddx28Q9CWT6 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC2.4□□□□□ -2.03
Ddx28Q9CWT6 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.4□□□□□ -2.03
Ddx28Q9CWT6 Gm37807-201ENSMUST00000194310 190 ntBASIC2.4□□□□□ -2.03
Ddx28Q9CWT6 Gm43739-201ENSMUST00000198294 307 ntBASIC2.4□□□□□ -2.03
Ddx28Q9CWT6 AC102369.1-201ENSMUST00000218415 373 ntBASIC2.4□□□□□ -2.03
Ddx28Q9CWT6 Gm23249-201ENSMUST00000083369 161 ntBASIC2.4□□□□□ -2.03
Ddx28Q9CWT6 Gm26164-201ENSMUST00000083793 104 ntBASIC2.4□□□□□ -2.03
Ddx28Q9CWT6 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.4□□□□□ -2.03
Ddx28Q9CWT6 Gm9218-201ENSMUST00000121068 2694 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Gm14402-201ENSMUST00000122217 508 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Gm12443-201ENSMUST00000122308 323 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Gm27926-201ENSMUST00000157180 66 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Gm24691-201ENSMUST00000157762 140 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Gm24082-201ENSMUST00000175175 83 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Gm27379-201ENSMUST00000183730 123 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Mir6346-201ENSMUST00000183982 81 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Gm43722-201ENSMUST00000196054 124 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Mir3068-202ENSMUST00000197755 79 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Mir7232-201ENSMUST00000197929 74 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Gm44459-201ENSMUST00000203926 160 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Gm8940-201ENSMUST00000212585 219 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 AC116589.4-201ENSMUST00000222390 216 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Snord42a-201ENSMUST00000082606 65 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Gm23721-201ENSMUST00000083005 107 ntBASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
Ddx28Q9CWT6 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Gm23128-201ENSMUST00000104257 132 ntBASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Gm24275-201ENSMUST00000116780 146 ntBASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Gm14602-201ENSMUST00000118625 340 ntBASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Gm11798-201ENSMUST00000119150 421 ntBASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Gm14821-201ENSMUST00000121975 435 ntBASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Gm22037-201ENSMUST00000157280 296 ntBASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Gm24504-201ENSMUST00000157679 100 ntBASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Gm23223-201ENSMUST00000158119 127 ntBASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Gm22085-201ENSMUST00000158344 110 ntBASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Gm24737-201ENSMUST00000158861 100 ntBASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Gm27410-201ENSMUST00000183851 115 ntBASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Gm23128-202ENSMUST00000196578 133 ntBASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Gm45452-201ENSMUST00000210905 177 ntBASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Gm25929-201ENSMUST00000082784 107 ntBASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Gm24817-201ENSMUST00000093672 105 ntBASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.38□□□□□ -2.03
Ddx28Q9CWT6 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Mir344c-201ENSMUST00000103919 92 ntBASIC2.37□□□□□ -2.03
Ddx28Q9CWT6 Gm24282-201ENSMUST00000104232 66 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 94.8 ms