Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm25773-201ENSMUST00000116718 127 ntBASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm7164-201ENSMUST00000117503 450 ntBASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm12779-201ENSMUST00000121496 143 ntBASIC2.25□□□□□ -2.05
Smc1aQ9CU62 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm24770-201ENSMUST00000158505 92 ntBASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm24053-201ENSMUST00000158620 105 ntBASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm24418-201ENSMUST00000177597 79 ntBASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm24639-201ENSMUST00000178518 79 ntBASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm23076-201ENSMUST00000179082 79 ntBASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm25077-201ENSMUST00000179157 79 ntBASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm27236-201ENSMUST00000184147 442 ntBASIC2.25□□□□□ -2.05
Smc1aQ9CU62 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm26328-201ENSMUST00000082821 107 ntBASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm25402-201ENSMUST00000082966 131 ntBASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm25794-201ENSMUST00000083286 107 ntBASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Mir301-201ENSMUST00000083655 86 ntBASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Smc1aQ9CU62 Mir758-201ENSMUST00000103260 81 ntBASIC2.24□□□□□ -2.05
Smc1aQ9CU62 Gm24984-201ENSMUST00000104454 133 ntBASIC2.24□□□□□ -2.05
Smc1aQ9CU62 Gm25454-201ENSMUST00000157947 315 ntBASIC2.24□□□□□ -2.05
Smc1aQ9CU62 Gm20689-201ENSMUST00000176033 279 ntBASIC2.24□□□□□ -2.05
Smc1aQ9CU62 Gm29231-201ENSMUST00000179850 319 ntBASIC2.24□□□□□ -2.05
Smc1aQ9CU62 Gm21729-201ENSMUST00000180058 664 ntBASIC2.24□□□□□ -2.05
Smc1aQ9CU62 Gm21853-201ENSMUST00000180071 664 ntBASIC2.24□□□□□ -2.05
Smc1aQ9CU62 Mir7225-201ENSMUST00000184178 54 ntBASIC2.24□□□□□ -2.05
Smc1aQ9CU62 Gm27539-201ENSMUST00000184971 224 ntBASIC2.24□□□□□ -2.05
Smc1aQ9CU62 Gm29495-201ENSMUST00000189319 664 ntBASIC2.24□□□□□ -2.05
Smc1aQ9CU62 Gm42807-201ENSMUST00000200141 329 ntBASIC2.24□□□□□ -2.05
Smc1aQ9CU62 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Smc1aQ9CU62 Gm45654-201ENSMUST00000210980 123 ntBASIC2.24□□□□□ -2.05
Smc1aQ9CU62 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.24□□□□□ -2.05
Smc1aQ9CU62 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.24□□□□□ -2.05
Smc1aQ9CU62 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.24□□□□□ -2.05
Smc1aQ9CU62 Gm22620-201ENSMUST00000082700 133 ntBASIC2.24□□□□□ -2.05
Smc1aQ9CU62 Mir10a-201ENSMUST00000083585 110 ntBASIC2.24□□□□□ -2.05
Smc1aQ9CU62 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.23□□□□□ -2.05
Smc1aQ9CU62 Gm14215-201ENSMUST00000120578 221 ntBASIC2.23□□□□□ -2.05
Smc1aQ9CU62 Gm22199-201ENSMUST00000122660 126 ntBASIC2.23□□□□□ -2.05
Smc1aQ9CU62 Gm25658-201ENSMUST00000158472 128 ntBASIC2.23□□□□□ -2.05
Smc1aQ9CU62 Mir669n-201ENSMUST00000158636 54 ntBASIC2.23□□□□□ -2.05
Smc1aQ9CU62 Gm21978-201ENSMUST00000179696 377 ntBASIC2.23□□□□□ -2.05
Smc1aQ9CU62 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Smc1aQ9CU62 Gm43510-201ENSMUST00000197922 353 ntBASIC2.23□□□□□ -2.05
Smc1aQ9CU62 Gm44408-201ENSMUST00000200205 66 ntBASIC2.23□□□□□ -2.05
Smc1aQ9CU62 Gm44938-201ENSMUST00000208614 427 ntBASIC2.23□□□□□ -2.05
Smc1aQ9CU62 Gm45386-201ENSMUST00000210194 218 ntBASIC2.23□□□□□ -2.05
Smc1aQ9CU62 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.23□□□□□ -2.05
Smc1aQ9CU62 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.23□□□□□ -2.05
Smc1aQ9CU62 AC117656.1-201ENSMUST00000225826 339 ntBASIC2.23□□□□□ -2.05
Smc1aQ9CU62 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Smc1aQ9CU62 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Smc1aQ9CU62 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.23□□□□□ -2.05
Smc1aQ9CU62 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.23□□□□□ -2.05
Smc1aQ9CU62 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Smc1aQ9CU62 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Smc1aQ9CU62 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
Smc1aQ9CU62 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Smc1aQ9CU62 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Smc1aQ9CU62 Gm11522-201ENSMUST00000120533 176 ntBASIC2.22□□□□□ -2.05
Smc1aQ9CU62 Gm24837-201ENSMUST00000158683 81 ntBASIC2.22□□□□□ -2.05
Smc1aQ9CU62 Gm25836-201ENSMUST00000158918 123 ntBASIC2.22□□□□□ -2.05
Smc1aQ9CU62 Gm26157-201ENSMUST00000158974 126 ntBASIC2.22□□□□□ -2.05
Smc1aQ9CU62 Gm25020-201ENSMUST00000178071 107 ntBASIC2.22□□□□□ -2.05
Smc1aQ9CU62 Gm28058-201ENSMUST00000186421 264 ntBASIC2.22□□□□□ -2.05
Smc1aQ9CU62 Gm28489-201ENSMUST00000186655 316 ntBASIC2.22□□□□□ -2.05
Smc1aQ9CU62 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC2.22□□□□□ -2.05
Smc1aQ9CU62 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC2.22□□□□□ -2.05
Smc1aQ9CU62 Ear14-201ENSMUST00000049559 468 ntBASIC2.22□□□□□ -2.05
Smc1aQ9CU62 Gm25636-201ENSMUST00000082666 133 ntBASIC2.22□□□□□ -2.05
Smc1aQ9CU62 Gm22723-201ENSMUST00000083820 129 ntBASIC2.22□□□□□ -2.05
Smc1aQ9CU62 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Smc1aQ9CU62 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Smc1aQ9CU62 Gm25113-201ENSMUST00000157185 143 ntBASIC2.21□□□□□ -2.06
Smc1aQ9CU62 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
Smc1aQ9CU62 Gm27722-201ENSMUST00000183908 76 ntBASIC2.21□□□□□ -2.06
Smc1aQ9CU62 Gm37361-201ENSMUST00000194345 132 ntBASIC2.21□□□□□ -2.06
Smc1aQ9CU62 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC2.21□□□□□ -2.06
Smc1aQ9CU62 Gm45296-201ENSMUST00000209625 205 ntBASIC2.21□□□□□ -2.06
Smc1aQ9CU62 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.21□□□□□ -2.06
Smc1aQ9CU62 AC124346.1-201ENSMUST00000218539 364 ntBASIC2.21□□□□□ -2.06
Smc1aQ9CU62 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.21□□□□□ -2.06
Smc1aQ9CU62 AC163660.3-201ENSMUST00000224253 1563 ntBASIC2.21□□□□□ -2.06
Smc1aQ9CU62 Gm25698-201ENSMUST00000082897 107 ntBASIC2.21□□□□□ -2.06
Smc1aQ9CU62 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
Smc1aQ9CU62 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
Smc1aQ9CU62 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.21□□□□□ -2.06
Smc1aQ9CU62 Gm42942-201ENSMUST00000196086 1328 ntBASIC2.2□□□□□ -2.06
Smc1aQ9CU62 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.2□□□□□ -2.06
Smc1aQ9CU62 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms