Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm18971-201ENSMUST00000197240 374 ntBASIC1.5□□□□□ -2.17
Use1Q9CQ56 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Use1Q9CQ56 Gm44990-201ENSMUST00000203922 217 ntBASIC1.5□□□□□ -2.17
Use1Q9CQ56 Gm44844-201ENSMUST00000207242 336 ntBASIC1.5□□□□□ -2.17
Use1Q9CQ56 AC192616.3-201ENSMUST00000220797 1124 ntBASIC1.5□□□□□ -2.17
Use1Q9CQ56 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm25992-201ENSMUST00000102437 109 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm24079-201ENSMUST00000104352 132 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm11363-201ENSMUST00000121672 548 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm24598-201ENSMUST00000122510 74 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm24480-201ENSMUST00000157442 103 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm24858-201ENSMUST00000158058 323 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm7925-201ENSMUST00000166690 401 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Mir5118-201ENSMUST00000175551 67 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm21737-201ENSMUST00000178112 664 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm23145-201ENSMUST00000178912 79 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm24862-201ENSMUST00000179103 79 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm23310-201ENSMUST00000179105 79 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm25461-201ENSMUST00000179293 79 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm21729-201ENSMUST00000180058 664 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm21853-201ENSMUST00000180071 664 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm20901-201ENSMUST00000180177 664 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Mir7068-201ENSMUST00000183439 74 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm29073-201ENSMUST00000185563 664 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm29495-201ENSMUST00000189319 664 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm28090-201ENSMUST00000189458 664 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm21647-201ENSMUST00000189755 664 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm29165-201ENSMUST00000190655 664 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm29211-201ENSMUST00000191470 664 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm36891-201ENSMUST00000191995 655 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm43914-201ENSMUST00000203592 594 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm44962-201ENSMUST00000206460 279 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm44910-201ENSMUST00000208451 396 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Gm2628-201ENSMUST00000218019 426 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 AC156560.1-201ENSMUST00000221425 256 ntBASIC1.49□□□□□ -2.17
Use1Q9CQ56 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
Use1Q9CQ56 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Use1Q9CQ56 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Use1Q9CQ56 Gm24889-201ENSMUST00000104388 132 ntBASIC1.48□□□□□ -2.17
Use1Q9CQ56 Gm23109-201ENSMUST00000116867 126 ntBASIC1.48□□□□□ -2.17
Use1Q9CQ56 Gm25541-201ENSMUST00000116888 126 ntBASIC1.48□□□□□ -2.17
Use1Q9CQ56 Gm15266-201ENSMUST00000119635 255 ntBASIC1.48□□□□□ -2.17
Use1Q9CQ56 Gm23589-201ENSMUST00000157660 105 ntBASIC1.48□□□□□ -2.17
Use1Q9CQ56 Gm26181-201ENSMUST00000157687 106 ntBASIC1.48□□□□□ -2.17
Use1Q9CQ56 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.48□□□□□ -2.17
Use1Q9CQ56 Gm20689-201ENSMUST00000176033 279 ntBASIC1.48□□□□□ -2.17
Use1Q9CQ56 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Use1Q9CQ56 Mir7679-201ENSMUST00000183379 63 ntBASIC1.48□□□□□ -2.17
Use1Q9CQ56 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC1.48□□□□□ -2.17
Use1Q9CQ56 Gm27265-201ENSMUST00000183559 77 ntBASIC1.48□□□□□ -2.17
Use1Q9CQ56 Mir6352-201ENSMUST00000184495 116 ntBASIC1.48□□□□□ -2.17
Use1Q9CQ56 Gm29603-201ENSMUST00000186792 334 ntBASIC1.48□□□□□ -2.17
Use1Q9CQ56 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.48□□□□□ -2.17
Use1Q9CQ56 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.48□□□□□ -2.17
Use1Q9CQ56 Gm22577-201ENSMUST00000083731 109 ntBASIC1.48□□□□□ -2.17
Use1Q9CQ56 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Use1Q9CQ56 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Use1Q9CQ56 Gm22591-201ENSMUST00000104243 106 ntBASIC1.47□□□□□ -2.17
Use1Q9CQ56 Gm6444-201ENSMUST00000119611 458 ntBASIC1.47□□□□□ -2.17
Use1Q9CQ56 Gm24892-201ENSMUST00000122747 104 ntBASIC1.47□□□□□ -2.17
Use1Q9CQ56 Gm26024-201ENSMUST00000158657 322 ntBASIC1.47□□□□□ -2.17
Use1Q9CQ56 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Use1Q9CQ56 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.47□□□□□ -2.17
Use1Q9CQ56 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.47□□□□□ -2.17
Use1Q9CQ56 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.47□□□□□ -2.17
Use1Q9CQ56 Gm44870-201ENSMUST00000207291 357 ntBASIC1.47□□□□□ -2.17
Use1Q9CQ56 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Use1Q9CQ56 AC163660.3-201ENSMUST00000224253 1563 ntBASIC1.47□□□□□ -2.17
Use1Q9CQ56 Gm15526-201ENSMUST00000112504 204 ntBASIC1.46□□□□□ -2.18
Use1Q9CQ56 Gm5396-201ENSMUST00000121222 532 ntBASIC1.46□□□□□ -2.18
Use1Q9CQ56 Gm12779-201ENSMUST00000121496 143 ntBASIC1.46□□□□□ -2.18
Use1Q9CQ56 Gm6025-201ENSMUST00000121517 201 ntBASIC1.46□□□□□ -2.18
Use1Q9CQ56 Gm24896-201ENSMUST00000122741 135 ntBASIC1.46□□□□□ -2.18
Use1Q9CQ56 Gm22075-201ENSMUST00000158599 192 ntBASIC1.46□□□□□ -2.18
Use1Q9CQ56 Gm22851-201ENSMUST00000178741 94 ntBASIC1.46□□□□□ -2.18
Use1Q9CQ56 Gm25074-201ENSMUST00000178782 94 ntBASIC1.46□□□□□ -2.18
Use1Q9CQ56 Gm28151-201ENSMUST00000189404 951 ntBASIC1.46□□□□□ -2.18
Use1Q9CQ56 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.46□□□□□ -2.18
Use1Q9CQ56 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.46□□□□□ -2.18
Use1Q9CQ56 Gm32300-201ENSMUST00000221735 515 ntBASIC1.46□□□□□ -2.18
Use1Q9CQ56 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.46□□□□□ -2.18
Use1Q9CQ56 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Use1Q9CQ56 Gm25589-201ENSMUST00000082502 166 ntBASIC1.46□□□□□ -2.18
Use1Q9CQ56 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.46□□□□□ -2.18
Use1Q9CQ56 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.46□□□□□ -2.18
Use1Q9CQ56 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Use1Q9CQ56 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Use1Q9CQ56 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.45□□□□□ -2.18
Use1Q9CQ56 Gm14793-201ENSMUST00000118739 311 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Gm12053-201ENSMUST00000119022 252 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Gm11359-201ENSMUST00000120039 567 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Gm14366-201ENSMUST00000121970 730 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Gm25059-201ENSMUST00000157367 117 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Snord13-201ENSMUST00000157627 104 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Gm22733-201ENSMUST00000158094 91 ntBASIC1.45□□□□□ -2.18
Use1Q9CQ56 Mir669n-201ENSMUST00000158636 54 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms