Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Sf3b1Q99NB9 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.96□□□□□ -2.1
Sf3b1Q99NB9 Gm25421-201ENSMUST00000104218 164 ntBASIC1.96□□□□□ -2.1
Sf3b1Q99NB9 Gm22771-201ENSMUST00000104449 91 ntBASIC1.96□□□□□ -2.1
Sf3b1Q99NB9 Gm24984-201ENSMUST00000104454 133 ntBASIC1.96□□□□□ -2.1
Sf3b1Q99NB9 Gm13432-201ENSMUST00000118861 241 ntBASIC1.96□□□□□ -2.1
Sf3b1Q99NB9 Gm24053-201ENSMUST00000158620 105 ntBASIC1.96□□□□□ -2.1
Sf3b1Q99NB9 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Sf3b1Q99NB9 Gm8151-201ENSMUST00000184817 871 ntBASIC1.96□□□□□ -2.1
Sf3b1Q99NB9 Gm18356-201ENSMUST00000185677 623 ntBASIC1.96□□□□□ -2.1
Sf3b1Q99NB9 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC1.96□□□□□ -2.1
Sf3b1Q99NB9 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC1.96□□□□□ -2.1
Sf3b1Q99NB9 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.96□□□□□ -2.1
Sf3b1Q99NB9 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.96□□□□□ -2.1
Sf3b1Q99NB9 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.96□□□□□ -2.1
Sf3b1Q99NB9 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC1.96□□□□□ -2.1
Sf3b1Q99NB9 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Sf3b1Q99NB9 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Sf3b1Q99NB9 AL645643.1-201ENSMUST00000222438 3897 ntBASIC1.96□□□□□ -2.1
Sf3b1Q99NB9 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Sf3b1Q99NB9 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC1.95□□□□□ -2.1
Sf3b1Q99NB9 Gm25507-201ENSMUST00000116981 144 ntBASIC1.95□□□□□ -2.1
Sf3b1Q99NB9 Gm14530-201ENSMUST00000122391 333 ntBASIC1.95□□□□□ -2.1
Sf3b1Q99NB9 Gm7925-201ENSMUST00000166690 401 ntBASIC1.95□□□□□ -2.1
Sf3b1Q99NB9 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Sf3b1Q99NB9 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Sf3b1Q99NB9 Gm27898-201ENSMUST00000183987 80 ntBASIC1.95□□□□□ -2.1
Sf3b1Q99NB9 Mir7j-201ENSMUST00000184427 122 ntBASIC1.95□□□□□ -2.1
Sf3b1Q99NB9 Gm18185-201ENSMUST00000186725 667 ntBASIC1.95□□□□□ -2.1
Sf3b1Q99NB9 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Sf3b1Q99NB9 Gm9402-201ENSMUST00000196849 388 ntBASIC1.95□□□□□ -2.1
Sf3b1Q99NB9 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC1.95□□□□□ -2.1
Sf3b1Q99NB9 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.95□□□□□ -2.1
Sf3b1Q99NB9 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.95□□□□□ -2.1
Sf3b1Q99NB9 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.95□□□□□ -2.1
Sf3b1Q99NB9 Gm13885-201ENSMUST00000117569 187 ntBASIC1.94□□□□□ -2.1
Sf3b1Q99NB9 Gm14823-201ENSMUST00000117698 238 ntBASIC1.94□□□□□ -2.1
Sf3b1Q99NB9 Gm14766-201ENSMUST00000121689 367 ntBASIC1.94□□□□□ -2.1
Sf3b1Q99NB9 Gm23000-201ENSMUST00000157083 139 ntBASIC1.94□□□□□ -2.1
Sf3b1Q99NB9 Gm25113-201ENSMUST00000157185 143 ntBASIC1.94□□□□□ -2.1
Sf3b1Q99NB9 Gm23641-201ENSMUST00000157857 101 ntBASIC1.94□□□□□ -2.1
Sf3b1Q99NB9 Gm25163-201ENSMUST00000158905 104 ntBASIC1.94□□□□□ -2.1
Sf3b1Q99NB9 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
Sf3b1Q99NB9 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC1.94□□□□□ -2.1
Sf3b1Q99NB9 Gm3724-201ENSMUST00000197957 349 ntBASIC1.94□□□□□ -2.1
Sf3b1Q99NB9 Mir691-201ENSMUST00000199719 78 ntBASIC1.94□□□□□ -2.1
Sf3b1Q99NB9 Gm26379-202ENSMUST00000200225 132 ntBASIC1.94□□□□□ -2.1
Sf3b1Q99NB9 AC117656.1-201ENSMUST00000225826 339 ntBASIC1.94□□□□□ -2.1
Sf3b1Q99NB9 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.94□□□□□ -2.1
Sf3b1Q99NB9 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.94□□□□□ -2.1
Sf3b1Q99NB9 Gm26108-201ENSMUST00000083973 191 ntBASIC1.94□□□□□ -2.1
Sf3b1Q99NB9 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Sf3b1Q99NB9 Gm22678-201ENSMUST00000116974 101 ntBASIC1.93□□□□□ -2.1
Sf3b1Q99NB9 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC1.93□□□□□ -2.1
Sf3b1Q99NB9 Gm25625-201ENSMUST00000157221 96 ntBASIC1.93□□□□□ -2.1
Sf3b1Q99NB9 Gm17161-201ENSMUST00000169187 524 ntBASIC1.93□□□□□ -2.1
Sf3b1Q99NB9 Gm37778-201ENSMUST00000191732 190 ntBASIC1.93□□□□□ -2.1
Sf3b1Q99NB9 Gm37658-201ENSMUST00000192672 315 ntBASIC1.93□□□□□ -2.1
Sf3b1Q99NB9 Gm42807-201ENSMUST00000200141 329 ntBASIC1.93□□□□□ -2.1
Sf3b1Q99NB9 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.93□□□□□ -2.1
Sf3b1Q99NB9 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Sf3b1Q99NB9 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.93□□□□□ -2.1
Sf3b1Q99NB9 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Sf3b1Q99NB9 Mir300-201ENSMUST00000083485 79 ntBASIC1.93□□□□□ -2.1
Sf3b1Q99NB9 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Sf3b1Q99NB9 Gm15215-201ENSMUST00000117773 489 ntBASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Gm11410-201ENSMUST00000120053 1143 ntBASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Gm24481-201ENSMUST00000157210 102 ntBASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Gm22556-201ENSMUST00000157803 100 ntBASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Gm24837-201ENSMUST00000158683 81 ntBASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Gm25457-201ENSMUST00000179509 107 ntBASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Mir6379-201ENSMUST00000183392 115 ntBASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Gm27588-201ENSMUST00000185096 263 ntBASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Gm25788-201ENSMUST00000082721 131 ntBASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Gm25402-201ENSMUST00000082966 131 ntBASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Gm22577-201ENSMUST00000083731 109 ntBASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.92□□□□□ -2.1
Sf3b1Q99NB9 Gm24907-201ENSMUST00000116932 128 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm11991-201ENSMUST00000119652 1074 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm23331-201ENSMUST00000157423 108 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm25888-201ENSMUST00000157778 302 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm27919-201ENSMUST00000185163 107 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm29657-201ENSMUST00000189807 342 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm18971-201ENSMUST00000197240 374 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm43865-201ENSMUST00000204721 127 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm44881-201ENSMUST00000205425 367 ntBASIC1.91□□□□□ -2.1
Sf3b1Q99NB9 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 167.4 ms