Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
H1fooQ8VIK3 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.73□□□□□ -1.97
H1fooQ8VIK3 Gm18337-201ENSMUST00000219023 5762 ntBASIC2.73□□□□□ -1.97
H1fooQ8VIK3 Gm24892-201ENSMUST00000122747 104 ntBASIC2.73□□□□□ -1.97
H1fooQ8VIK3 Gm25625-201ENSMUST00000157221 96 ntBASIC2.73□□□□□ -1.97
H1fooQ8VIK3 Mir1934-201ENSMUST00000158127 83 ntBASIC2.73□□□□□ -1.97
H1fooQ8VIK3 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC2.73□□□□□ -1.97
H1fooQ8VIK3 Gm25457-201ENSMUST00000179509 107 ntBASIC2.73□□□□□ -1.97
H1fooQ8VIK3 Gm27761-201ENSMUST00000184091 131 ntBASIC2.73□□□□□ -1.97
H1fooQ8VIK3 Gm29005-201ENSMUST00000186773 320 ntBASIC2.73□□□□□ -1.97
H1fooQ8VIK3 Gm28647-201ENSMUST00000188416 197 ntBASIC2.73□□□□□ -1.97
H1fooQ8VIK3 Gm17966-201ENSMUST00000193453 594 ntBASIC2.73□□□□□ -1.97
H1fooQ8VIK3 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.73□□□□□ -1.97
H1fooQ8VIK3 Gm21007-201ENSMUST00000221024 326 ntBASIC2.73□□□□□ -1.97
H1fooQ8VIK3 Gm10088-201ENSMUST00000074116 423 ntBASIC2.73□□□□□ -1.97
H1fooQ8VIK3 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
H1fooQ8VIK3 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
H1fooQ8VIK3 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
H1fooQ8VIK3 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
H1fooQ8VIK3 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
H1fooQ8VIK3 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
H1fooQ8VIK3 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
H1fooQ8VIK3 Gm24581-201ENSMUST00000103962 133 ntBASIC2.72□□□□□ -1.97
H1fooQ8VIK3 Gm15002-201ENSMUST00000118406 452 ntBASIC2.72□□□□□ -1.97
H1fooQ8VIK3 Gm11253-201ENSMUST00000118486 201 ntBASIC2.72□□□□□ -1.97
H1fooQ8VIK3 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC2.72□□□□□ -1.97
H1fooQ8VIK3 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
H1fooQ8VIK3 Gm6788-201ENSMUST00000166459 270 ntBASIC2.72□□□□□ -1.97
H1fooQ8VIK3 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.72□□□□□ -1.97
H1fooQ8VIK3 Mir6399-201ENSMUST00000184050 84 ntBASIC2.72□□□□□ -1.97
H1fooQ8VIK3 Gm27747-201ENSMUST00000184707 85 ntBASIC2.72□□□□□ -1.97
H1fooQ8VIK3 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
H1fooQ8VIK3 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC2.72□□□□□ -1.97
H1fooQ8VIK3 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC2.72□□□□□ -1.97
H1fooQ8VIK3 AC239878.2-201ENSMUST00000224048 464 ntBASIC2.72□□□□□ -1.97
H1fooQ8VIK3 AC167669.4-201ENSMUST00000225967 140 ntBASIC2.72□□□□□ -1.97
H1fooQ8VIK3 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
H1fooQ8VIK3 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
H1fooQ8VIK3 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
H1fooQ8VIK3 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
H1fooQ8VIK3 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.71□□□□□ -1.97
H1fooQ8VIK3 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
H1fooQ8VIK3 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
H1fooQ8VIK3 Gm44150-201ENSMUST00000203317 2619 ntBASIC2.71□□□□□ -1.98
H1fooQ8VIK3 Gm26423-201ENSMUST00000104277 128 ntBASIC2.71□□□□□ -1.98
H1fooQ8VIK3 Mir878-201ENSMUST00000104680 78 ntBASIC2.71□□□□□ -1.98
H1fooQ8VIK3 Mir1b-201ENSMUST00000117012 122 ntBASIC2.71□□□□□ -1.98
H1fooQ8VIK3 Gm14803-201ENSMUST00000117163 361 ntBASIC2.71□□□□□ -1.98
H1fooQ8VIK3 Gm13076-201ENSMUST00000118041 204 ntBASIC2.71□□□□□ -1.98
H1fooQ8VIK3 Gm15799-201ENSMUST00000120899 289 ntBASIC2.71□□□□□ -1.98
H1fooQ8VIK3 Gm23977-201ENSMUST00000177871 74 ntBASIC2.71□□□□□ -1.98
H1fooQ8VIK3 Gm26200-201ENSMUST00000180273 79 ntBASIC2.71□□□□□ -1.98
H1fooQ8VIK3 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC2.71□□□□□ -1.98
H1fooQ8VIK3 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.71□□□□□ -1.98
H1fooQ8VIK3 Gm44024-201ENSMUST00000203008 476 ntBASIC2.71□□□□□ -1.98
H1fooQ8VIK3 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.71□□□□□ -1.98
H1fooQ8VIK3 AC165092.3-201ENSMUST00000223602 282 ntBASIC2.71□□□□□ -1.98
H1fooQ8VIK3 CT010454.1-201ENSMUST00000225975 265 ntBASIC2.71□□□□□ -1.98
H1fooQ8VIK3 Gm24356-201ENSMUST00000082859 106 ntBASIC2.71□□□□□ -1.98
H1fooQ8VIK3 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC2.71□□□□□ -1.98
H1fooQ8VIK3 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
H1fooQ8VIK3 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
H1fooQ8VIK3 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
H1fooQ8VIK3 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
H1fooQ8VIK3 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
H1fooQ8VIK3 Gm25727-201ENSMUST00000104522 131 ntBASIC2.7□□□□□ -1.98
H1fooQ8VIK3 Gm12213-201ENSMUST00000119924 353 ntBASIC2.7□□□□□ -1.98
H1fooQ8VIK3 Gm14782-201ENSMUST00000120151 195 ntBASIC2.7□□□□□ -1.98
H1fooQ8VIK3 n-R5s32-201ENSMUST00000122495 103 ntBASIC2.7□□□□□ -1.98
H1fooQ8VIK3 Gm25805-201ENSMUST00000122788 108 ntBASIC2.7□□□□□ -1.98
H1fooQ8VIK3 Gm25012-201ENSMUST00000158396 164 ntBASIC2.7□□□□□ -1.98
H1fooQ8VIK3 Gm26468-201ENSMUST00000158644 106 ntBASIC2.7□□□□□ -1.98
H1fooQ8VIK3 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC2.7□□□□□ -1.98
H1fooQ8VIK3 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
H1fooQ8VIK3 Gm25748-201ENSMUST00000175487 70 ntBASIC2.7□□□□□ -1.98
H1fooQ8VIK3 Gm28002-201ENSMUST00000184832 100 ntBASIC2.7□□□□□ -1.98
H1fooQ8VIK3 Trbv6-201ENSMUST00000193743 276 ntBASIC2.7□□□□□ -1.98
H1fooQ8VIK3 AL929417.1-201ENSMUST00000214901 124 ntBASIC2.7□□□□□ -1.98
H1fooQ8VIK3 AC145736.2-201ENSMUST00000216305 365 ntBASIC2.7□□□□□ -1.98
H1fooQ8VIK3 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC2.7□□□□□ -1.98
H1fooQ8VIK3 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
H1fooQ8VIK3 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
H1fooQ8VIK3 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC2.7□□□□□ -1.98
H1fooQ8VIK3 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.7□□□□□ -1.98
H1fooQ8VIK3 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.7□□□□□ -1.98
H1fooQ8VIK3 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
H1fooQ8VIK3 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
H1fooQ8VIK3 Gm13992-201ENSMUST00000120558 156 ntBASIC2.69□□□□□ -1.98
H1fooQ8VIK3 Gm14845-201ENSMUST00000121259 306 ntBASIC2.69□□□□□ -1.98
H1fooQ8VIK3 Defb44-ps-201ENSMUST00000126871 219 ntBASIC2.69□□□□□ -1.98
H1fooQ8VIK3 Gm25572-201ENSMUST00000157527 172 ntBASIC2.69□□□□□ -1.98
H1fooQ8VIK3 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.69□□□□□ -1.98
H1fooQ8VIK3 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC2.69□□□□□ -1.98
H1fooQ8VIK3 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.69□□□□□ -1.98
H1fooQ8VIK3 Mir7047-201ENSMUST00000184595 64 ntBASIC2.69□□□□□ -1.98
H1fooQ8VIK3 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2.69□□□□□ -1.98
H1fooQ8VIK3 Gm44425-201ENSMUST00000203739 429 ntBASIC2.69□□□□□ -1.98
H1fooQ8VIK3 Gm43991-201ENSMUST00000203751 274 ntBASIC2.69□□□□□ -1.98
H1fooQ8VIK3 Gm44600-201ENSMUST00000208540 111 ntBASIC2.69□□□□□ -1.98
H1fooQ8VIK3 AC163033.1-201ENSMUST00000218608 157 ntBASIC2.69□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms