Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm24716-201ENSMUST00000157524 104 ntBASIC3.17□□□□□ -1.9
Clrn1Q8K445 Gm25572-201ENSMUST00000157527 172 ntBASIC3.17□□□□□ -1.9
Clrn1Q8K445 Gm25519-201ENSMUST00000158392 127 ntBASIC3.17□□□□□ -1.9
Clrn1Q8K445 Gm17052-201ENSMUST00000165496 289 ntBASIC3.17□□□□□ -1.9
Clrn1Q8K445 Gm24497-201ENSMUST00000177868 191 ntBASIC3.17□□□□□ -1.9
Clrn1Q8K445 Gm22910-201ENSMUST00000178568 132 ntBASIC3.17□□□□□ -1.9
Clrn1Q8K445 Gm22286-201ENSMUST00000179708 107 ntBASIC3.17□□□□□ -1.9
Clrn1Q8K445 Gm27476-201ENSMUST00000183366 104 ntBASIC3.17□□□□□ -1.9
Clrn1Q8K445 Gm28627-201ENSMUST00000186141 453 ntBASIC3.17□□□□□ -1.9
Clrn1Q8K445 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC3.17□□□□□ -1.9
Clrn1Q8K445 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.17□□□□□ -1.9
Clrn1Q8K445 Gm37097-201ENSMUST00000193676 336 ntBASIC3.17□□□□□ -1.9
Clrn1Q8K445 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.17□□□□□ -1.9
Clrn1Q8K445 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.17□□□□□ -1.9
Clrn1Q8K445 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.17□□□□□ -1.9
Clrn1Q8K445 Gm21007-201ENSMUST00000221024 326 ntBASIC3.17□□□□□ -1.9
Clrn1Q8K445 Gm23925-201ENSMUST00000082471 132 ntBASIC3.17□□□□□ -1.9
Clrn1Q8K445 Snord35b-201ENSMUST00000082833 87 ntBASIC3.17□□□□□ -1.9
Clrn1Q8K445 Gm23444-201ENSMUST00000082922 191 ntBASIC3.17□□□□□ -1.9
Clrn1Q8K445 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Clrn1Q8K445 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.17□□□□□ -1.9
Clrn1Q8K445 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.17□□□□□ -1.9
Clrn1Q8K445 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Clrn1Q8K445 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.16□□□□□ -1.9
Clrn1Q8K445 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Clrn1Q8K445 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
Clrn1Q8K445 Gm24581-201ENSMUST00000103962 133 ntBASIC3.16□□□□□ -1.9
Clrn1Q8K445 Gm25272-201ENSMUST00000104293 128 ntBASIC3.16□□□□□ -1.9
Clrn1Q8K445 Gm24403-201ENSMUST00000104616 130 ntBASIC3.16□□□□□ -1.9
Clrn1Q8K445 Gm26026-201ENSMUST00000122726 123 ntBASIC3.16□□□□□ -1.9
Clrn1Q8K445 Gm23559-201ENSMUST00000157824 103 ntBASIC3.16□□□□□ -1.9
Clrn1Q8K445 Trbv6-201ENSMUST00000193743 276 ntBASIC3.16□□□□□ -1.9
Clrn1Q8K445 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC3.16□□□□□ -1.9
Clrn1Q8K445 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC3.16□□□□□ -1.9
Clrn1Q8K445 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.16□□□□□ -1.9
Clrn1Q8K445 Gm26495-201ENSMUST00000083152 137 ntBASIC3.16□□□□□ -1.9
Clrn1Q8K445 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.16□□□□□ -1.9
Clrn1Q8K445 Gm4746-201ENSMUST00000120395 2406 ntBASIC3.16□□□□□ -1.9
Clrn1Q8K445 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Clrn1Q8K445 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Clrn1Q8K445 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Clrn1Q8K445 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.16□□□□□ -1.9
Clrn1Q8K445 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Clrn1Q8K445 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
Clrn1Q8K445 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.15□□□□□ -1.9
Clrn1Q8K445 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Clrn1Q8K445 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.15□□□□□ -1.9
Clrn1Q8K445 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.15□□□□□ -1.9
Clrn1Q8K445 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Clrn1Q8K445 Gm24582-201ENSMUST00000103967 103 ntBASIC3.15□□□□□ -1.91
Clrn1Q8K445 Gm25764-201ENSMUST00000104092 134 ntBASIC3.15□□□□□ -1.91
Clrn1Q8K445 Gm16032-201ENSMUST00000118534 168 ntBASIC3.15□□□□□ -1.91
Clrn1Q8K445 Gm26027-201ENSMUST00000122725 268 ntBASIC3.15□□□□□ -1.91
Clrn1Q8K445 Gm22792-201ENSMUST00000157225 133 ntBASIC3.15□□□□□ -1.91
Clrn1Q8K445 Gm24056-201ENSMUST00000158617 146 ntBASIC3.15□□□□□ -1.91
Clrn1Q8K445 Gm25615-201ENSMUST00000177836 94 ntBASIC3.15□□□□□ -1.91
Clrn1Q8K445 Gm27928-201ENSMUST00000183747 256 ntBASIC3.15□□□□□ -1.91
Clrn1Q8K445 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.15□□□□□ -1.91
Clrn1Q8K445 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.15□□□□□ -1.91
Clrn1Q8K445 Gm23039-201ENSMUST00000083870 161 ntBASIC3.15□□□□□ -1.91
Clrn1Q8K445 Mir471-201ENSMUST00000093596 67 ntBASIC3.15□□□□□ -1.91
Clrn1Q8K445 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Clrn1Q8K445 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Clrn1Q8K445 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Clrn1Q8K445 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Clrn1Q8K445 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.14□□□□□ -1.91
Clrn1Q8K445 Gm24936-201ENSMUST00000122598 247 ntBASIC3.14□□□□□ -1.91
Clrn1Q8K445 Gm25015-201ENSMUST00000158400 128 ntBASIC3.14□□□□□ -1.91
Clrn1Q8K445 Gm25835-201ENSMUST00000158917 144 ntBASIC3.14□□□□□ -1.91
Clrn1Q8K445 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Clrn1Q8K445 Gm18486-201ENSMUST00000184040 298 ntBASIC3.14□□□□□ -1.91
Clrn1Q8K445 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Clrn1Q8K445 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC3.14□□□□□ -1.91
Clrn1Q8K445 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.14□□□□□ -1.91
Clrn1Q8K445 AC166830.2-201ENSMUST00000225821 196 ntBASIC3.14□□□□□ -1.91
Clrn1Q8K445 Gm24147-201ENSMUST00000082763 144 ntBASIC3.14□□□□□ -1.91
Clrn1Q8K445 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Clrn1Q8K445 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Clrn1Q8K445 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Clrn1Q8K445 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.14□□□□□ -1.91
Clrn1Q8K445 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Clrn1Q8K445 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.14□□□□□ -1.91
Clrn1Q8K445 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.14□□□□□ -1.91
Clrn1Q8K445 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Clrn1Q8K445 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.13□□□□□ -1.91
Clrn1Q8K445 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Clrn1Q8K445 Gm8935-202ENSMUST00000105727 1959 ntBASIC3.13□□□□□ -1.91
Clrn1Q8K445 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Clrn1Q8K445 Gm14687-201ENSMUST00000120206 363 ntBASIC3.13□□□□□ -1.91
Clrn1Q8K445 Gm23886-201ENSMUST00000122684 313 ntBASIC3.13□□□□□ -1.91
Clrn1Q8K445 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
Clrn1Q8K445 Gm24008-201ENSMUST00000157733 138 ntBASIC3.13□□□□□ -1.91
Clrn1Q8K445 Gm24553-201ENSMUST00000158653 131 ntBASIC3.13□□□□□ -1.91
Clrn1Q8K445 Gm24811-201ENSMUST00000175313 100 ntBASIC3.13□□□□□ -1.91
Clrn1Q8K445 Igkv13-76-201ENSMUST00000197621 347 ntBASIC3.13□□□□□ -1.91
Clrn1Q8K445 Gm42739-201ENSMUST00000200687 226 ntBASIC3.13□□□□□ -1.91
Clrn1Q8K445 Gm30674-201ENSMUST00000214523 392 ntBASIC3.13□□□□□ -1.91
Clrn1Q8K445 AC158982.2-201ENSMUST00000226283 184 ntBASIC3.13□□□□□ -1.91
Clrn1Q8K445 Snora7a-201ENSMUST00000082629 140 ntBASIC3.13□□□□□ -1.91
Clrn1Q8K445 Mir101b-201ENSMUST00000083622 97 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms