Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 AC138667.2-201ENSMUST00000224880 598 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 Gm23517-201ENSMUST00000082830 192 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 Snora3-201ENSMUST00000083082 132 ntBASIC1.19□□□□□ -2.22
Ccdc28aQ8CEI3 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 Gm6568-201ENSMUST00000122274 697 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 Gm24997-201ENSMUST00000157910 105 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 Gm22731-201ENSMUST00000158086 94 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 Gm25069-201ENSMUST00000175238 86 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 Gm25933-201ENSMUST00000178943 108 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 Gm22633-201ENSMUST00000179834 107 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 Mir7063-201ENSMUST00000184158 91 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 Gm10193-201ENSMUST00000188288 231 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 Igkv4-65-201ENSMUST00000196986 358 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 Gm44666-201ENSMUST00000208544 391 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 AC112274.2-201ENSMUST00000218436 170 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 AC101677.1-201ENSMUST00000218590 158 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 CT009733.1-203ENSMUST00000224033 451 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 Snord14a-201ENSMUST00000082807 87 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 Gm24921-201ENSMUST00000083024 107 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 Mir16-2-201ENSMUST00000083672 95 ntBASIC1.18□□□□□ -2.22
Ccdc28aQ8CEI3 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm45872-201ENSMUST00000209804 1584 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm24079-201ENSMUST00000104352 132 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm14007-201ENSMUST00000118288 210 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm15659-201ENSMUST00000118881 341 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm12372-201ENSMUST00000121654 768 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 n-R5s80-201ENSMUST00000122596 111 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm23111-201ENSMUST00000122652 105 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm23170-201ENSMUST00000157158 106 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm22038-201ENSMUST00000157277 242 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm25706-201ENSMUST00000157828 247 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm22099-201ENSMUST00000157925 123 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm26173-201ENSMUST00000158416 136 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm22944-201ENSMUST00000158662 133 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Traj60-201ENSMUST00000167781 54 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm25457-201ENSMUST00000179509 107 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm37438-201ENSMUST00000192813 393 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm43676-201ENSMUST00000197532 540 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Mir3961-201ENSMUST00000198795 59 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm42774-201ENSMUST00000198854 283 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 AL929265.1-201ENSMUST00000213427 125 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm21937-201ENSMUST00000222825 218 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 CT025538.2-201ENSMUST00000226083 772 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm22062-201ENSMUST00000082563 107 ntBASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Ccdc28aQ8CEI3 Gm13672-201ENSMUST00000117554 459 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm14887-201ENSMUST00000119522 663 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm15719-201ENSMUST00000120619 635 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm13368-201ENSMUST00000122443 430 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm22073-201ENSMUST00000122668 189 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm25115-201ENSMUST00000157187 140 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm23339-201ENSMUST00000158962 139 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm15914-201ENSMUST00000161922 309 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm18396-201ENSMUST00000177095 361 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm25670-201ENSMUST00000178423 107 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm26239-201ENSMUST00000178842 107 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm24267-201ENSMUST00000179841 107 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm9022-202ENSMUST00000183285 483 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm38167-201ENSMUST00000195704 1178 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm43583-201ENSMUST00000199235 303 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm19032-201ENSMUST00000208584 592 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm45382-201ENSMUST00000210607 151 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm32300-201ENSMUST00000221735 515 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 CT025602.1-201ENSMUST00000227281 382 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm24292-201ENSMUST00000082888 107 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm23245-201ENSMUST00000083370 135 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.16□□□□□ -2.22
Ccdc28aQ8CEI3 Gm26377-201ENSMUST00000102184 108 ntBASIC1.15□□□□□ -2.23
Ccdc28aQ8CEI3 Gm12639-201ENSMUST00000121400 493 ntBASIC1.15□□□□□ -2.23
Ccdc28aQ8CEI3 Gm24768-201ENSMUST00000158512 94 ntBASIC1.15□□□□□ -2.23
Ccdc28aQ8CEI3 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC1.15□□□□□ -2.23
Ccdc28aQ8CEI3 Gm23619-201ENSMUST00000178411 94 ntBASIC1.15□□□□□ -2.23
Ccdc28aQ8CEI3 Gm25474-201ENSMUST00000179052 94 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms