Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm11798-201ENSMUST00000119150 421 ntBASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 Gm12837-201ENSMUST00000120131 373 ntBASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 Gm22083-201ENSMUST00000157586 102 ntBASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 Gm24885-201ENSMUST00000158783 270 ntBASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 Gm25162-201ENSMUST00000158906 159 ntBASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 Gm25284-201ENSMUST00000180345 141 ntBASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 AC132437.1-201ENSMUST00000218308 320 ntBASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 AC164297.3-201ENSMUST00000224238 94 ntBASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 Gm23721-201ENSMUST00000083005 107 ntBASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 Mir137-201ENSMUST00000083635 73 ntBASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 Snord7-201ENSMUST00000083781 97 ntBASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Atg4aQ8C9S8 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 Gm15282-201ENSMUST00000117707 300 ntBASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 Gm13457-201ENSMUST00000117885 267 ntBASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 Gm14020-201ENSMUST00000118165 662 ntBASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 Gm13913-201ENSMUST00000121126 260 ntBASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 Gm16510-201ENSMUST00000153501 249 ntBASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 Gm22093-201ENSMUST00000158980 111 ntBASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 Gm21978-201ENSMUST00000179696 377 ntBASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 Gm28717-201ENSMUST00000189950 315 ntBASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 Gm38238-201ENSMUST00000194334 346 ntBASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 Gm45403-201ENSMUST00000209453 276 ntBASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 AC160550.3-201ENSMUST00000226818 400 ntBASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 Snord68-201ENSMUST00000082516 86 ntBASIC2.67□□□□□ -1.98
Atg4aQ8C9S8 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 Gm11322-201ENSMUST00000118095 435 ntBASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 Gm13210-201ENSMUST00000121483 273 ntBASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 Gm15065-201ENSMUST00000121699 273 ntBASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 Gm24481-201ENSMUST00000157210 102 ntBASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 Mir1942-201ENSMUST00000157274 63 ntBASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 Gm24085-201ENSMUST00000175172 116 ntBASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 Gm22242-201ENSMUST00000175224 118 ntBASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 Gm27410-201ENSMUST00000183851 115 ntBASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 Gm28008-201ENSMUST00000184021 186 ntBASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 Gm43406-201ENSMUST00000200356 334 ntBASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 Gm44844-201ENSMUST00000207242 336 ntBASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
Atg4aQ8C9S8 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
Atg4aQ8C9S8 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
Atg4aQ8C9S8 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.65□□□□□ -1.98
Atg4aQ8C9S8 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
Atg4aQ8C9S8 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
Atg4aQ8C9S8 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Gm26015-201ENSMUST00000104402 125 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Gm13355-201ENSMUST00000117996 317 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Gm11606-201ENSMUST00000120706 617 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Gm11414-201ENSMUST00000121795 263 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Gm13409-201ENSMUST00000122072 546 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Gm11819-201ENSMUST00000122192 372 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Gm22479-201ENSMUST00000122566 81 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Gm16218-201ENSMUST00000155424 388 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Gm23470-201ENSMUST00000157129 120 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Gm27926-201ENSMUST00000157180 66 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Mir1927-201ENSMUST00000158579 109 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Gm27399-201ENSMUST00000184250 78 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Gm28740-201ENSMUST00000186142 215 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Gm43035-201ENSMUST00000197626 517 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Mir7232-201ENSMUST00000197929 74 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Gm45315-201ENSMUST00000209283 333 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 AC138290.2-201ENSMUST00000218822 369 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Olfr197-201ENSMUST00000080031 926 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Gm26066-201ENSMUST00000083385 109 ntBASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Atg4aQ8C9S8 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Atg4aQ8C9S8 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Atg4aQ8C9S8 Gm15896-201ENSMUST00000118045 440 ntBASIC2.64□□□□□ -1.99
Atg4aQ8C9S8 Gm13880-201ENSMUST00000118421 474 ntBASIC2.64□□□□□ -1.99
Atg4aQ8C9S8 Gm13518-201ENSMUST00000120018 233 ntBASIC2.64□□□□□ -1.99
Atg4aQ8C9S8 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Atg4aQ8C9S8 Gm24997-201ENSMUST00000157910 105 ntBASIC2.64□□□□□ -1.99
Atg4aQ8C9S8 Gm25486-201ENSMUST00000158726 63 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms