Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm8114-201ENSMUST00000172225 484 ntBASIC1.41□□□□□ -2.18
Usp47Q8BY87 Gm24713-201ENSMUST00000178850 107 ntBASIC1.41□□□□□ -2.18
Usp47Q8BY87 Gm25448-201ENSMUST00000180065 107 ntBASIC1.41□□□□□ -2.18
Usp47Q8BY87 Gm37801-201ENSMUST00000194754 274 ntBASIC1.41□□□□□ -2.18
Usp47Q8BY87 Gm23848-201ENSMUST00000083826 106 ntBASIC1.41□□□□□ -2.18
Usp47Q8BY87 Gm14989-201ENSMUST00000120497 207 ntBASIC1.4□□□□□ -2.19
Usp47Q8BY87 Gm23172-201ENSMUST00000157160 124 ntBASIC1.4□□□□□ -2.19
Usp47Q8BY87 Mir1949-201ENSMUST00000157434 141 ntBASIC1.4□□□□□ -2.19
Usp47Q8BY87 Gm22217-201ENSMUST00000157556 313 ntBASIC1.4□□□□□ -2.19
Usp47Q8BY87 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.4□□□□□ -2.19
Usp47Q8BY87 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Usp47Q8BY87 Gm18691-201ENSMUST00000203593 872 ntBASIC1.4□□□□□ -2.19
Usp47Q8BY87 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.4□□□□□ -2.19
Usp47Q8BY87 AC140477.1-201ENSMUST00000222354 246 ntBASIC1.4□□□□□ -2.19
Usp47Q8BY87 AC125464.1-201ENSMUST00000228013 512 ntBASIC1.4□□□□□ -2.19
Usp47Q8BY87 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Usp47Q8BY87 Mir27b-201ENSMUST00000083541 73 ntBASIC1.4□□□□□ -2.19
Usp47Q8BY87 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Usp47Q8BY87 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.4□□□□□ -2.19
Usp47Q8BY87 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.4□□□□□ -2.19
Usp47Q8BY87 Gm11359-201ENSMUST00000120039 567 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 Snord13-201ENSMUST00000157627 104 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 Gm22186-201ENSMUST00000157822 122 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 Gm21737-201ENSMUST00000178112 664 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 Gm21729-201ENSMUST00000180058 664 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 Gm21853-201ENSMUST00000180071 664 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 Gm20901-201ENSMUST00000180177 664 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 Gm27878-201ENSMUST00000184000 106 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 Gm29550-201ENSMUST00000185543 285 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 Gm29073-201ENSMUST00000185563 664 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 Gm29603-201ENSMUST00000186792 334 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 Gm29495-201ENSMUST00000189319 664 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 Gm28090-201ENSMUST00000189458 664 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 Gm21647-201ENSMUST00000189755 664 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 Gm29165-201ENSMUST00000190655 664 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 Gm29211-201ENSMUST00000191470 664 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 Gm36891-201ENSMUST00000191995 655 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 n-R5s96-201ENSMUST00000082574 124 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 Gm26203-201ENSMUST00000082911 114 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 Gm23246-201ENSMUST00000083371 67 ntBASIC1.39□□□□□ -2.19
Usp47Q8BY87 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Usp47Q8BY87 Mir706-201ENSMUST00000102262 84 ntBASIC1.38□□□□□ -2.19
Usp47Q8BY87 Gm15175-201ENSMUST00000117629 132 ntBASIC1.38□□□□□ -2.19
Usp47Q8BY87 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.38□□□□□ -2.19
Usp47Q8BY87 Mir1942-201ENSMUST00000157274 63 ntBASIC1.38□□□□□ -2.19
Usp47Q8BY87 Gm27396-201ENSMUST00000157708 58 ntBASIC1.38□□□□□ -2.19
Usp47Q8BY87 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Usp47Q8BY87 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC1.38□□□□□ -2.19
Usp47Q8BY87 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.38□□□□□ -2.19
Usp47Q8BY87 Mir6380-201ENSMUST00000184334 81 ntBASIC1.38□□□□□ -2.19
Usp47Q8BY87 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Usp47Q8BY87 Gm17911-201ENSMUST00000210806 877 ntBASIC1.38□□□□□ -2.19
Usp47Q8BY87 AC156795.1-201ENSMUST00000214655 414 ntBASIC1.38□□□□□ -2.19
Usp47Q8BY87 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC1.38□□□□□ -2.19
Usp47Q8BY87 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.38□□□□□ -2.19
Usp47Q8BY87 Gm23202-201ENSMUST00000104376 129 ntBASIC1.37□□□□□ -2.19
Usp47Q8BY87 Gm25787-201ENSMUST00000104709 92 ntBASIC1.37□□□□□ -2.19
Usp47Q8BY87 Gm25294-201ENSMUST00000122791 104 ntBASIC1.37□□□□□ -2.19
Usp47Q8BY87 Snord11-201ENSMUST00000158468 84 ntBASIC1.37□□□□□ -2.19
Usp47Q8BY87 Gm17164-201ENSMUST00000169013 506 ntBASIC1.37□□□□□ -2.19
Usp47Q8BY87 Snora24-201ENSMUST00000174989 130 ntBASIC1.37□□□□□ -2.19
Usp47Q8BY87 Snord116l14-201ENSMUST00000179875 94 ntBASIC1.37□□□□□ -2.19
Usp47Q8BY87 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC1.37□□□□□ -2.19
Usp47Q8BY87 Gm28453-203ENSMUST00000187041 189 ntBASIC1.37□□□□□ -2.19
Usp47Q8BY87 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.37□□□□□ -2.19
Usp47Q8BY87 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.37□□□□□ -2.19
Usp47Q8BY87 AC123656.2-201ENSMUST00000226726 227 ntBASIC1.37□□□□□ -2.19
Usp47Q8BY87 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC1.37□□□□□ -2.19
Usp47Q8BY87 Gm23516-201ENSMUST00000093728 107 ntBASIC1.37□□□□□ -2.19
Usp47Q8BY87 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
Usp47Q8BY87 Mir466n-201ENSMUST00000104798 94 ntBASIC1.36□□□□□ -2.19
Usp47Q8BY87 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Usp47Q8BY87 Gm23008-201ENSMUST00000158946 80 ntBASIC1.36□□□□□ -2.19
Usp47Q8BY87 2900035J10Rik-201ENSMUST00000194966 532 ntBASIC1.36□□□□□ -2.19
Usp47Q8BY87 Mir3068-202ENSMUST00000197755 79 ntBASIC1.36□□□□□ -2.19
Usp47Q8BY87 Gm44830-201ENSMUST00000207667 584 ntBASIC1.36□□□□□ -2.19
Usp47Q8BY87 AC122341.1-201ENSMUST00000227291 560 ntBASIC1.36□□□□□ -2.19
Usp47Q8BY87 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Usp47Q8BY87 Gm25080-201ENSMUST00000082526 107 ntBASIC1.36□□□□□ -2.19
Usp47Q8BY87 Gm26328-201ENSMUST00000082821 107 ntBASIC1.36□□□□□ -2.19
Usp47Q8BY87 Gm25794-201ENSMUST00000083286 107 ntBASIC1.36□□□□□ -2.19
Usp47Q8BY87 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.35□□□□□ -2.19
Usp47Q8BY87 Gm24340-201ENSMUST00000104208 97 ntBASIC1.35□□□□□ -2.19
Usp47Q8BY87 Gm6587-201ENSMUST00000120219 613 ntBASIC1.35□□□□□ -2.19
Usp47Q8BY87 Mir1904-201ENSMUST00000122702 80 ntBASIC1.35□□□□□ -2.19
Usp47Q8BY87 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC1.35□□□□□ -2.19
Usp47Q8BY87 Gm25166-201ENSMUST00000158909 111 ntBASIC1.35□□□□□ -2.19
Usp47Q8BY87 Gm25243-201ENSMUST00000174912 207 ntBASIC1.35□□□□□ -2.19
Usp47Q8BY87 Snord87-201ENSMUST00000175437 87 ntBASIC1.35□□□□□ -2.19
Usp47Q8BY87 Gm25020-201ENSMUST00000178071 107 ntBASIC1.35□□□□□ -2.19
Usp47Q8BY87 Gm29216-201ENSMUST00000187117 492 ntBASIC1.35□□□□□ -2.19
Usp47Q8BY87 Gm9236-201ENSMUST00000196892 587 ntBASIC1.35□□□□□ -2.19
Usp47Q8BY87 Gm45268-201ENSMUST00000210046 370 ntBASIC1.35□□□□□ -2.19
Usp47Q8BY87 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC1.35□□□□□ -2.19
Usp47Q8BY87 AC123062.1-201ENSMUST00000221287 481 ntBASIC1.35□□□□□ -2.19
Usp47Q8BY87 AC192334.2-201ENSMUST00000223087 1091 ntBASIC1.35□□□□□ -2.19
Usp47Q8BY87 AC115357.1-201ENSMUST00000227575 466 ntBASIC1.35□□□□□ -2.19
Usp47Q8BY87 Gm23454-201ENSMUST00000083332 133 ntBASIC1.35□□□□□ -2.19
Usp47Q8BY87 Gm25088-201ENSMUST00000101803 79 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 112.7 ms