Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Gm12412-201ENSMUST00000121867 328 ntBASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 Gm25054-201ENSMUST00000157370 97 ntBASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 Gm22961-201ENSMUST00000157964 106 ntBASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 Gm24213-201ENSMUST00000158255 258 ntBASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 Gm26400-201ENSMUST00000175012 85 ntBASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 Gm26297-201ENSMUST00000179464 132 ntBASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 Mir8096-201ENSMUST00000184526 127 ntBASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 Gm27249-201ENSMUST00000185049 328 ntBASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 Gm29397-201ENSMUST00000185205 333 ntBASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 Gm29602-201ENSMUST00000186887 442 ntBASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 Gm9370-201ENSMUST00000222787 609 ntBASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 Gm650-201ENSMUST00000144428 1551 ntBASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 Gm36989-201ENSMUST00000193225 2160 ntBASIC3.15□□□□□ -1.91
Trerf1Q8BXJ2 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Gm13378-201ENSMUST00000117483 336 ntBASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Mir1942-201ENSMUST00000157274 63 ntBASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Gm23586-201ENSMUST00000157657 123 ntBASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Gm28744-201ENSMUST00000189939 340 ntBASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Gm42570-201ENSMUST00000195937 292 ntBASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Gm44881-201ENSMUST00000205425 367 ntBASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Gm46997-201ENSMUST00000222108 217 ntBASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 CT010454.1-201ENSMUST00000225975 265 ntBASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Gm37941-201ENSMUST00000192170 2309 ntBASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.14□□□□□ -1.91
Trerf1Q8BXJ2 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 Gm13880-201ENSMUST00000118421 474 ntBASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 Gm26102-201ENSMUST00000157251 284 ntBASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 Gm23120-201ENSMUST00000157654 287 ntBASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 Gm22187-201ENSMUST00000157819 129 ntBASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 Gm29262-201ENSMUST00000190084 196 ntBASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 Gm32175-201ENSMUST00000193641 346 ntBASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 Gm37361-201ENSMUST00000194345 132 ntBASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 Gm43746-201ENSMUST00000200028 317 ntBASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 Gm15235-201ENSMUST00000200572 194 ntBASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 Gm45395-201ENSMUST00000209891 559 ntBASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 Gm45557-201ENSMUST00000210004 1651 ntBASIC3.13□□□□□ -1.91
Trerf1Q8BXJ2 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Gm23578-201ENSMUST00000103943 104 ntBASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Gm13355-201ENSMUST00000117996 317 ntBASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Gm12815-201ENSMUST00000121737 135 ntBASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Gm23713-201ENSMUST00000157353 70 ntBASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Gm22615-201ENSMUST00000158102 70 ntBASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Gm9830-201ENSMUST00000178509 357 ntBASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Mir6346-201ENSMUST00000183982 81 ntBASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Gm43286-201ENSMUST00000197420 424 ntBASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Gm42672-201ENSMUST00000197821 352 ntBASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 AC126267.1-201ENSMUST00000214282 284 ntBASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Gm26457-201ENSMUST00000082678 78 ntBASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Snord14d-201ENSMUST00000083424 86 ntBASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Mir496a-201ENSMUST00000093627 79 ntBASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Trerf1Q8BXJ2 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.11□□□□□ -1.91
Trerf1Q8BXJ2 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
Trerf1Q8BXJ2 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trerf1Q8BXJ2 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.11□□□□□ -1.91
Trerf1Q8BXJ2 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trerf1Q8BXJ2 Gm24172-201ENSMUST00000104127 117 ntBASIC3.11□□□□□ -1.91
Trerf1Q8BXJ2 Gm23836-201ENSMUST00000104434 129 ntBASIC3.11□□□□□ -1.91
Trerf1Q8BXJ2 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC3.11□□□□□ -1.91
Trerf1Q8BXJ2 Gm25490-201ENSMUST00000158734 130 ntBASIC3.11□□□□□ -1.91
Trerf1Q8BXJ2 Gm6801-201ENSMUST00000190697 339 ntBASIC3.11□□□□□ -1.91
Trerf1Q8BXJ2 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trerf1Q8BXJ2 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC3.11□□□□□ -1.91
Trerf1Q8BXJ2 Gm18000-201ENSMUST00000212153 800 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 93.9 ms