Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm23911-201ENSMUST00000104596 134 ntBASIC4.16□□□□□ -1.74
Usp40Q8BWR4 Gm22315-201ENSMUST00000158010 143 ntBASIC4.16□□□□□ -1.74
Usp40Q8BWR4 Gm25606-201ENSMUST00000158363 95 ntBASIC4.16□□□□□ -1.74
Usp40Q8BWR4 Gm20542-201ENSMUST00000174582 372 ntBASIC4.16□□□□□ -1.74
Usp40Q8BWR4 Gm22118-201ENSMUST00000175593 171 ntBASIC4.16□□□□□ -1.74
Usp40Q8BWR4 Gm25935-201ENSMUST00000178746 107 ntBASIC4.16□□□□□ -1.74
Usp40Q8BWR4 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.16□□□□□ -1.74
Usp40Q8BWR4 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.16□□□□□ -1.74
Usp40Q8BWR4 AC122320.1-201ENSMUST00000227233 105 ntBASIC4.16□□□□□ -1.74
Usp40Q8BWR4 Mir10a-201ENSMUST00000083585 110 ntBASIC4.16□□□□□ -1.74
Usp40Q8BWR4 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Usp40Q8BWR4 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Usp40Q8BWR4 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Usp40Q8BWR4 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Usp40Q8BWR4 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC4.16□□□□□ -1.74
Usp40Q8BWR4 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Usp40Q8BWR4 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Usp40Q8BWR4 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Usp40Q8BWR4 Gm22003-201ENSMUST00000101885 107 ntBASIC4.15□□□□□ -1.75
Usp40Q8BWR4 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Usp40Q8BWR4 Gm23219-201ENSMUST00000158123 87 ntBASIC4.15□□□□□ -1.75
Usp40Q8BWR4 Gm25716-201ENSMUST00000158628 104 ntBASIC4.15□□□□□ -1.75
Usp40Q8BWR4 Gm17166-201ENSMUST00000172006 431 ntBASIC4.15□□□□□ -1.75
Usp40Q8BWR4 Mir3965-201ENSMUST00000175570 69 ntBASIC4.15□□□□□ -1.75
Usp40Q8BWR4 Gm22756-201ENSMUST00000180118 107 ntBASIC4.15□□□□□ -1.75
Usp40Q8BWR4 Mir7062-201ENSMUST00000185038 66 ntBASIC4.15□□□□□ -1.75
Usp40Q8BWR4 Gm6651-201ENSMUST00000189471 271 ntBASIC4.15□□□□□ -1.75
Usp40Q8BWR4 Gm37763-201ENSMUST00000193445 120 ntBASIC4.15□□□□□ -1.75
Usp40Q8BWR4 Gm37796-201ENSMUST00000195327 134 ntBASIC4.15□□□□□ -1.75
Usp40Q8BWR4 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Usp40Q8BWR4 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC4.15□□□□□ -1.75
Usp40Q8BWR4 Gm45273-201ENSMUST00000211559 281 ntBASIC4.15□□□□□ -1.75
Usp40Q8BWR4 AC155715.1-201ENSMUST00000213575 463 ntBASIC4.15□□□□□ -1.75
Usp40Q8BWR4 AC127371.1-202ENSMUST00000228923 306 ntBASIC4.15□□□□□ -1.75
Usp40Q8BWR4 Gm26457-201ENSMUST00000082678 78 ntBASIC4.15□□□□□ -1.75
Usp40Q8BWR4 Gm26054-201ENSMUST00000083037 107 ntBASIC4.15□□□□□ -1.75
Usp40Q8BWR4 Gm24492-201ENSMUST00000083798 107 ntBASIC4.15□□□□□ -1.75
Usp40Q8BWR4 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Usp40Q8BWR4 Gm22936-201ENSMUST00000103955 126 ntBASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Gm11065-201ENSMUST00000111462 228 ntBASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Gm22141-201ENSMUST00000157403 277 ntBASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Gm24958-201ENSMUST00000158009 97 ntBASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Gm24930-201ENSMUST00000158315 83 ntBASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Gm26701-201ENSMUST00000181571 234 ntBASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Mir6917-201ENSMUST00000184111 61 ntBASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Gm27245-201ENSMUST00000184385 376 ntBASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Gm43193-201ENSMUST00000197732 441 ntBASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Gm32222-201ENSMUST00000203296 298 ntBASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Gm44521-201ENSMUST00000206469 217 ntBASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Gm44657-201ENSMUST00000208568 450 ntBASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Gm45907-201ENSMUST00000213023 193 ntBASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Gm23454-201ENSMUST00000083332 133 ntBASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Mir32-201ENSMUST00000083610 70 ntBASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Usp40Q8BWR4 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Usp40Q8BWR4 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
Usp40Q8BWR4 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Usp40Q8BWR4 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
Usp40Q8BWR4 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
Usp40Q8BWR4 Gm24951-201ENSMUST00000102182 109 ntBASIC4.13□□□□□ -1.75
Usp40Q8BWR4 Gm24068-201ENSMUST00000104513 132 ntBASIC4.13□□□□□ -1.75
Usp40Q8BWR4 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC4.13□□□□□ -1.75
Usp40Q8BWR4 Gm13581-201ENSMUST00000120675 278 ntBASIC4.13□□□□□ -1.75
Usp40Q8BWR4 Gm23584-201ENSMUST00000157655 129 ntBASIC4.13□□□□□ -1.75
Usp40Q8BWR4 Gm20450-201ENSMUST00000173652 147 ntBASIC4.13□□□□□ -1.75
Usp40Q8BWR4 Gm6615-201ENSMUST00000199426 631 ntBASIC4.13□□□□□ -1.75
Usp40Q8BWR4 AC167721.1-201ENSMUST00000217088 279 ntBASIC4.13□□□□□ -1.75
Usp40Q8BWR4 AC115735.2-201ENSMUST00000227135 351 ntBASIC4.13□□□□□ -1.75
Usp40Q8BWR4 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Usp40Q8BWR4 Gm22061-201ENSMUST00000082557 107 ntBASIC4.13□□□□□ -1.75
Usp40Q8BWR4 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.13□□□□□ -1.75
Usp40Q8BWR4 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.13□□□□□ -1.75
Usp40Q8BWR4 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Usp40Q8BWR4 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Usp40Q8BWR4 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC4.12□□□□□ -1.75
Usp40Q8BWR4 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC4.12□□□□□ -1.75
Usp40Q8BWR4 Gm12191-201ENSMUST00000118307 348 ntBASIC4.12□□□□□ -1.75
Usp40Q8BWR4 Gm12550-201ENSMUST00000118478 329 ntBASIC4.12□□□□□ -1.75
Usp40Q8BWR4 Gm9703-201ENSMUST00000119573 343 ntBASIC4.12□□□□□ -1.75
Usp40Q8BWR4 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC4.12□□□□□ -1.75
Usp40Q8BWR4 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC4.12□□□□□ -1.75
Usp40Q8BWR4 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC4.12□□□□□ -1.75
Usp40Q8BWR4 AC123803.1-201ENSMUST00000216093 189 ntBASIC4.12□□□□□ -1.75
Usp40Q8BWR4 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC4.12□□□□□ -1.75
Usp40Q8BWR4 AC121942.2-201ENSMUST00000223824 600 ntBASIC4.12□□□□□ -1.75
Usp40Q8BWR4 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC4.12□□□□□ -1.75
Usp40Q8BWR4 Gm10343-201ENSMUST00000096279 348 ntBASIC4.12□□□□□ -1.75
Usp40Q8BWR4 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Usp40Q8BWR4 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Usp40Q8BWR4 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Usp40Q8BWR4 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Usp40Q8BWR4 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.11□□□□□ -1.75
Usp40Q8BWR4 Gm24671-201ENSMUST00000104159 158 ntBASIC4.11□□□□□ -1.75
Usp40Q8BWR4 Gm12071-201ENSMUST00000121968 469 ntBASIC4.11□□□□□ -1.75
Usp40Q8BWR4 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC4.11□□□□□ -1.75
Usp40Q8BWR4 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 317.5 ms