Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Gm29011-201ENSMUST00000191059 712 ntBASIC0.36□□□□□ -2.35
Ttc28Q80XJ3 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
Ttc28Q80XJ3 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.36□□□□□ -2.35
Ttc28Q80XJ3 Gm22061-201ENSMUST00000082557 107 ntBASIC0.36□□□□□ -2.35
Ttc28Q80XJ3 Gm23690-201ENSMUST00000083036 94 ntBASIC0.36□□□□□ -2.35
Ttc28Q80XJ3 Mir208b-201ENSMUST00000104735 77 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 n-R5s207-201ENSMUST00000122497 118 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Gm26256-201ENSMUST00000122499 186 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Mir3086-201ENSMUST00000175072 87 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Gm18356-201ENSMUST00000185677 623 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Gm38274-201ENSMUST00000195689 148 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Gm44404-201ENSMUST00000203979 636 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Gm45438-201ENSMUST00000210242 564 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Gm24142-201ENSMUST00000101960 107 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Gm23983-201ENSMUST00000157142 114 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Gm23124-201ENSMUST00000157650 107 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Gm24056-201ENSMUST00000158617 146 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Gm15508-201ENSMUST00000160330 325 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Gm37743-201ENSMUST00000194645 376 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Gm43245-201ENSMUST00000197603 468 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Gm45207-201ENSMUST00000207469 145 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Gm25128-201ENSMUST00000083339 76 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Gm24256-201ENSMUST00000083696 84 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Snord35a-201ENSMUST00000083884 90 ntBASIC0.35□□□□□ -2.35
Ttc28Q80XJ3 Snord116l9-201ENSMUST00000101891 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm26504-201ENSMUST00000102033 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm24271-201ENSMUST00000102327 111 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm15223-201ENSMUST00000120989 826 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 AA413626-201ENSMUST00000121125 494 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm25032-201ENSMUST00000175411 84 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm20613-201ENSMUST00000175828 345 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm26502-201ENSMUST00000177732 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Snord116l13-201ENSMUST00000177737 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm25350-201ENSMUST00000177849 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Snord116l15-201ENSMUST00000177940 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm23446-201ENSMUST00000177977 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Snord116l4-201ENSMUST00000177982 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm26201-201ENSMUST00000178047 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm24711-201ENSMUST00000178062 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm24609-201ENSMUST00000178166 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm23265-201ENSMUST00000178321 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm22812-201ENSMUST00000178329 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Snord116l3-201ENSMUST00000178370 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm26246-201ENSMUST00000178388 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm25155-201ENSMUST00000178450 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm24760-201ENSMUST00000178530 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm22285-201ENSMUST00000178576 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm22417-201ENSMUST00000178656 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Snord116l2-201ENSMUST00000178675 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm26270-201ENSMUST00000178690 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Snord116l16-201ENSMUST00000178777 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm23313-201ENSMUST00000178931 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Snord116l17-201ENSMUST00000178936 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm23089-201ENSMUST00000178947 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Snord116l10-201ENSMUST00000179053 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm24153-201ENSMUST00000179280 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm25597-201ENSMUST00000179388 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Snord116l1-201ENSMUST00000179518 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm25816-201ENSMUST00000179764 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Snord116l8-201ENSMUST00000179889 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Snord116l7-201ENSMUST00000179895 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Snord116l5-201ENSMUST00000179927 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Snord116l6-201ENSMUST00000179955 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm26188-201ENSMUST00000179963 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm26433-201ENSMUST00000180227 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Snord116l11-201ENSMUST00000180312 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm22128-201ENSMUST00000180346 94 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm29389-201ENSMUST00000191562 352 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 AC165293.1-201ENSMUST00000219669 329 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 CT009764.1-201ENSMUST00000222260 483 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gm22299-201ENSMUST00000082663 136 ntBASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
Ttc28Q80XJ3 Mir466f-1-201ENSMUST00000104779 94 ntBASIC0.33□□□□□ -2.36
Ttc28Q80XJ3 Gm14918-201ENSMUST00000118153 268 ntBASIC0.33□□□□□ -2.36
Ttc28Q80XJ3 Gm6664-201ENSMUST00000119138 468 ntBASIC0.33□□□□□ -2.36
Ttc28Q80XJ3 Gm25413-201ENSMUST00000158544 312 ntBASIC0.33□□□□□ -2.36
Ttc28Q80XJ3 Gm26195-201ENSMUST00000175035 101 ntBASIC0.33□□□□□ -2.36
Ttc28Q80XJ3 Gm26968-201ENSMUST00000182894 481 ntBASIC0.33□□□□□ -2.36
Ttc28Q80XJ3 Gm18854-201ENSMUST00000211196 329 ntBASIC0.33□□□□□ -2.36
Ttc28Q80XJ3 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC0.33□□□□□ -2.36
Ttc28Q80XJ3 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.33□□□□□ -2.36
Ttc28Q80XJ3 Gm26175-201ENSMUST00000083794 131 ntBASIC0.33□□□□□ -2.36
Ttc28Q80XJ3 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC0.33□□□□□ -2.36
Ttc28Q80XJ3 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
Ttc28Q80XJ3 Gm25647-201ENSMUST00000101832 78 ntBASIC0.33□□□□□ -2.36
Ttc28Q80XJ3 Gm25823-201ENSMUST00000101995 78 ntBASIC0.33□□□□□ -2.36
Ttc28Q80XJ3 Gm9001-201ENSMUST00000121642 399 ntBASIC0.33□□□□□ -2.36
Ttc28Q80XJ3 Gm14903-201ENSMUST00000122435 537 ntBASIC0.33□□□□□ -2.36
Ttc28Q80XJ3 Gm24141-201ENSMUST00000122776 115 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms