Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm28439-201ENSMUST00000187714 876 ntBASIC1.32□□□□□ -2.2
Rpap1Q80TE0 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
Rpap1Q80TE0 Gm45101-201ENSMUST00000208327 232 ntBASIC1.32□□□□□ -2.2
Rpap1Q80TE0 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.32□□□□□ -2.2
Rpap1Q80TE0 Gm24920-201ENSMUST00000083018 85 ntBASIC1.32□□□□□ -2.2
Rpap1Q80TE0 Gm23506-201ENSMUST00000083077 107 ntBASIC1.32□□□□□ -2.2
Rpap1Q80TE0 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.31□□□□□ -2.2
Rpap1Q80TE0 Gm14774-201ENSMUST00000117857 536 ntBASIC1.31□□□□□ -2.2
Rpap1Q80TE0 Gm6664-201ENSMUST00000119138 468 ntBASIC1.31□□□□□ -2.2
Rpap1Q80TE0 Gm6985-201ENSMUST00000121255 271 ntBASIC1.31□□□□□ -2.2
Rpap1Q80TE0 Snord11-201ENSMUST00000158468 84 ntBASIC1.31□□□□□ -2.2
Rpap1Q80TE0 Mir7091-201ENSMUST00000184075 79 ntBASIC1.31□□□□□ -2.2
Rpap1Q80TE0 Gm28412-201ENSMUST00000187243 177 ntBASIC1.31□□□□□ -2.2
Rpap1Q80TE0 Gm44125-201ENSMUST00000203068 448 ntBASIC1.31□□□□□ -2.2
Rpap1Q80TE0 Gm44554-201ENSMUST00000208738 147 ntBASIC1.31□□□□□ -2.2
Rpap1Q80TE0 Gm22974-201ENSMUST00000083301 103 ntBASIC1.31□□□□□ -2.2
Rpap1Q80TE0 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Rpap1Q80TE0 Gm23741-201ENSMUST00000097237 171 ntBASIC1.31□□□□□ -2.2
Rpap1Q80TE0 Zfp640-202ENSMUST00000224116 1562 ntBASIC1.3□□□□□ -2.2
Rpap1Q80TE0 Gm14445-201ENSMUST00000117051 1484 ntBASIC1.3□□□□□ -2.2
Rpap1Q80TE0 Gm23332-201ENSMUST00000157424 275 ntBASIC1.3□□□□□ -2.2
Rpap1Q80TE0 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Rpap1Q80TE0 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Rpap1Q80TE0 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Rpap1Q80TE0 Gm24137-201ENSMUST00000180055 79 ntBASIC1.3□□□□□ -2.2
Rpap1Q80TE0 Gm22391-201ENSMUST00000180356 79 ntBASIC1.3□□□□□ -2.2
Rpap1Q80TE0 Gm28862-201ENSMUST00000188246 163 ntBASIC1.3□□□□□ -2.2
Rpap1Q80TE0 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
Rpap1Q80TE0 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC1.3□□□□□ -2.2
Rpap1Q80TE0 Gm18242-201ENSMUST00000218455 542 ntBASIC1.3□□□□□ -2.2
Rpap1Q80TE0 AC152951.1-201ENSMUST00000218907 266 ntBASIC1.3□□□□□ -2.2
Rpap1Q80TE0 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.3□□□□□ -2.2
Rpap1Q80TE0 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.3□□□□□ -2.2
Rpap1Q80TE0 Gm24610-201ENSMUST00000083270 109 ntBASIC1.3□□□□□ -2.2
Rpap1Q80TE0 Gm25257-201ENSMUST00000083907 110 ntBASIC1.3□□□□□ -2.2
Rpap1Q80TE0 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
Rpap1Q80TE0 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Mdga2-203ENSMUST00000113942 423 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Mir1949-201ENSMUST00000157434 141 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm23538-201ENSMUST00000157535 101 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm24846-201ENSMUST00000158033 108 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm25873-201ENSMUST00000180317 107 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Mir6370-201ENSMUST00000183510 120 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm28825-201ENSMUST00000186233 238 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm28838-201ENSMUST00000186338 315 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm29635-201ENSMUST00000187221 315 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm29026-201ENSMUST00000187787 315 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm28797-201ENSMUST00000188543 315 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm28855-201ENSMUST00000188680 315 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm28705-201ENSMUST00000189548 315 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm28939-201ENSMUST00000190351 315 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm28223-201ENSMUST00000190469 315 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm29092-201ENSMUST00000190768 315 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm44988-201ENSMUST00000203835 1161 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm44961-201ENSMUST00000207450 196 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm44825-201ENSMUST00000207557 150 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm44598-201ENSMUST00000207566 150 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm45636-201ENSMUST00000210497 1064 ntBASIC1.29□□□□□ -2.2
Rpap1Q80TE0 Gm24582-201ENSMUST00000103967 103 ntBASIC1.28□□□□□ -2.2
Rpap1Q80TE0 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.28□□□□□ -2.2
Rpap1Q80TE0 Gm9703-201ENSMUST00000119573 343 ntBASIC1.28□□□□□ -2.2
Rpap1Q80TE0 Gm14599-201ENSMUST00000120469 474 ntBASIC1.28□□□□□ -2.2
Rpap1Q80TE0 Gm25711-201ENSMUST00000158633 128 ntBASIC1.28□□□□□ -2.2
Rpap1Q80TE0 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC1.28□□□□□ -2.2
Rpap1Q80TE0 Gm25874-201ENSMUST00000178030 79 ntBASIC1.28□□□□□ -2.2
Rpap1Q80TE0 Mir6399-201ENSMUST00000184050 84 ntBASIC1.28□□□□□ -2.2
Rpap1Q80TE0 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
Rpap1Q80TE0 Gm38044-201ENSMUST00000192964 487 ntBASIC1.28□□□□□ -2.2
Rpap1Q80TE0 Gm44024-201ENSMUST00000203008 476 ntBASIC1.28□□□□□ -2.2
Rpap1Q80TE0 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.28□□□□□ -2.2
Rpap1Q80TE0 AC131085.1-201ENSMUST00000224746 656 ntBASIC1.28□□□□□ -2.2
Rpap1Q80TE0 Gm26166-201ENSMUST00000083788 107 ntBASIC1.28□□□□□ -2.2
Rpap1Q80TE0 AC125532.1-201ENSMUST00000216210 2334 ntBASIC1.28□□□□□ -2.21
Rpap1Q80TE0 Gm22779-201ENSMUST00000104085 107 ntBASIC1.27□□□□□ -2.21
Rpap1Q80TE0 Gm25497-201ENSMUST00000104425 132 ntBASIC1.27□□□□□ -2.21
Rpap1Q80TE0 Gm26157-201ENSMUST00000158974 126 ntBASIC1.27□□□□□ -2.21
Rpap1Q80TE0 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.27□□□□□ -2.21
Rpap1Q80TE0 Gm25194-201ENSMUST00000177987 79 ntBASIC1.27□□□□□ -2.21
Rpap1Q80TE0 Gm27607-201ENSMUST00000185162 122 ntBASIC1.27□□□□□ -2.21
Rpap1Q80TE0 Gm37578-201ENSMUST00000192256 1177 ntBASIC1.27□□□□□ -2.21
Rpap1Q80TE0 Gm34015-201ENSMUST00000194908 451 ntBASIC1.27□□□□□ -2.21
Rpap1Q80TE0 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
Rpap1Q80TE0 Gm17991-201ENSMUST00000208139 297 ntBASIC1.27□□□□□ -2.21
Rpap1Q80TE0 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.27□□□□□ -2.21
Rpap1Q80TE0 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.27□□□□□ -2.21
Rpap1Q80TE0 Gm23735-201ENSMUST00000082551 134 ntBASIC1.27□□□□□ -2.21
Rpap1Q80TE0 Mir467h-201ENSMUST00000116759 121 ntBASIC1.26□□□□□ -2.21
Rpap1Q80TE0 Gm12656-201ENSMUST00000118149 577 ntBASIC1.26□□□□□ -2.21
Rpap1Q80TE0 Gm2003-201ENSMUST00000118537 636 ntBASIC1.26□□□□□ -2.21
Rpap1Q80TE0 Gm2768-201ENSMUST00000121062 250 ntBASIC1.26□□□□□ -2.21
Rpap1Q80TE0 Gm24777-201ENSMUST00000157644 107 ntBASIC1.26□□□□□ -2.21
Rpap1Q80TE0 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC1.26□□□□□ -2.21
Rpap1Q80TE0 Gm17377-201ENSMUST00000165184 207 ntBASIC1.26□□□□□ -2.21
Rpap1Q80TE0 Mir3964-201ENSMUST00000174898 74 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 9.6 ms