Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm23202-201ENSMUST00000104376 129 ntBASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 Gm23435-201ENSMUST00000157183 156 ntBASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 Gm25392-201ENSMUST00000157335 297 ntBASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 Gm24857-201ENSMUST00000158061 310 ntBASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 Gm25476-201ENSMUST00000175125 185 ntBASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 Gm29597-201ENSMUST00000188035 308 ntBASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 Gm43238-201ENSMUST00000196463 359 ntBASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 Gm44320-201ENSMUST00000199276 86 ntBASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 Gm45403-201ENSMUST00000209453 276 ntBASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 AL603630.1-201ENSMUST00000214781 147 ntBASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Smarca1Q6PGB8 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Smarca1Q6PGB8 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.88□□□□□ -1.95
Smarca1Q6PGB8 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Smarca1Q6PGB8 Mir682-201ENSMUST00000102281 96 ntBASIC2.88□□□□□ -1.95
Smarca1Q6PGB8 Mir669o-201ENSMUST00000103898 96 ntBASIC2.88□□□□□ -1.95
Smarca1Q6PGB8 Gm12550-201ENSMUST00000118478 329 ntBASIC2.88□□□□□ -1.95
Smarca1Q6PGB8 Gm23331-201ENSMUST00000157423 108 ntBASIC2.88□□□□□ -1.95
Smarca1Q6PGB8 Gm26411-201ENSMUST00000157668 107 ntBASIC2.88□□□□□ -1.95
Smarca1Q6PGB8 Gm25454-201ENSMUST00000157947 315 ntBASIC2.88□□□□□ -1.95
Smarca1Q6PGB8 Gm15235-201ENSMUST00000200572 194 ntBASIC2.88□□□□□ -1.95
Smarca1Q6PGB8 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.88□□□□□ -1.95
Smarca1Q6PGB8 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC2.88□□□□□ -1.95
Smarca1Q6PGB8 AC158606.1-201ENSMUST00000220078 325 ntBASIC2.88□□□□□ -1.95
Smarca1Q6PGB8 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.88□□□□□ -1.95
Smarca1Q6PGB8 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Smarca1Q6PGB8 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.88□□□□□ -1.95
Smarca1Q6PGB8 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Smarca1Q6PGB8 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Smarca1Q6PGB8 Gm14402-201ENSMUST00000122217 508 ntBASIC2.87□□□□□ -1.95
Smarca1Q6PGB8 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.87□□□□□ -1.95
Smarca1Q6PGB8 Gm25486-201ENSMUST00000158726 63 ntBASIC2.87□□□□□ -1.95
Smarca1Q6PGB8 Rpl31-ps15-201ENSMUST00000181857 375 ntBASIC2.87□□□□□ -1.95
Smarca1Q6PGB8 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.87□□□□□ -1.95
Smarca1Q6PGB8 Gm43578-201ENSMUST00000201250 459 ntBASIC2.87□□□□□ -1.95
Smarca1Q6PGB8 Gm45678-201ENSMUST00000210509 295 ntBASIC2.87□□□□□ -1.95
Smarca1Q6PGB8 Gm9318-201ENSMUST00000222444 438 ntBASIC2.87□□□□□ -1.95
Smarca1Q6PGB8 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.87□□□□□ -1.95
Smarca1Q6PGB8 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Smarca1Q6PGB8 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
Smarca1Q6PGB8 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
Smarca1Q6PGB8 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Smarca1Q6PGB8 Gm14770-201ENSMUST00000122197 312 ntBASIC2.86□□□□□ -1.95
Smarca1Q6PGB8 Mir5118-201ENSMUST00000175551 67 ntBASIC2.86□□□□□ -1.95
Smarca1Q6PGB8 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC2.86□□□□□ -1.95
Smarca1Q6PGB8 Gm22308-201ENSMUST00000177609 107 ntBASIC2.86□□□□□ -1.95
Smarca1Q6PGB8 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.86□□□□□ -1.95
Smarca1Q6PGB8 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.86□□□□□ -1.95
Smarca1Q6PGB8 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.86□□□□□ -1.95
Smarca1Q6PGB8 Gm43976-201ENSMUST00000203637 235 ntBASIC2.86□□□□□ -1.95
Smarca1Q6PGB8 Gm44687-201ENSMUST00000204975 235 ntBASIC2.86□□□□□ -1.95
Smarca1Q6PGB8 Gm18346-201ENSMUST00000216782 325 ntBASIC2.86□□□□□ -1.95
Smarca1Q6PGB8 Gm22997-201ENSMUST00000082845 107 ntBASIC2.86□□□□□ -1.95
Smarca1Q6PGB8 Gm22622-201ENSMUST00000082870 129 ntBASIC2.86□□□□□ -1.95
Smarca1Q6PGB8 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Smarca1Q6PGB8 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.86□□□□□ -1.95
Smarca1Q6PGB8 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Smarca1Q6PGB8 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Gm27926-201ENSMUST00000157180 66 ntBASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Gm26105-201ENSMUST00000157253 190 ntBASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Gm23600-201ENSMUST00000157260 71 ntBASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Gm23599-201ENSMUST00000157261 251 ntBASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Gm22416-201ENSMUST00000158590 88 ntBASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Gm25119-201ENSMUST00000158815 88 ntBASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Gm24084-201ENSMUST00000175173 137 ntBASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Gm37923-201ENSMUST00000191624 161 ntBASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Gm44881-201ENSMUST00000205425 367 ntBASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Gm9174-201ENSMUST00000078149 255 ntBASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Gm26164-201ENSMUST00000083793 104 ntBASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Gm23040-201ENSMUST00000083869 163 ntBASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Smarca1Q6PGB8 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
Smarca1Q6PGB8 Gm13378-201ENSMUST00000117483 336 ntBASIC2.84□□□□□ -1.95
Smarca1Q6PGB8 Gm14574-201ENSMUST00000120644 279 ntBASIC2.84□□□□□ -1.95
Smarca1Q6PGB8 Gm14972-201ENSMUST00000121780 364 ntBASIC2.84□□□□□ -1.95
Smarca1Q6PGB8 Gm22073-201ENSMUST00000122668 189 ntBASIC2.84□□□□□ -1.95
Smarca1Q6PGB8 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC2.84□□□□□ -1.95
Smarca1Q6PGB8 Gm24192-201ENSMUST00000157978 145 ntBASIC2.84□□□□□ -1.95
Smarca1Q6PGB8 Gm22836-201ENSMUST00000158441 61 ntBASIC2.84□□□□□ -1.95
Smarca1Q6PGB8 Gm8292-201ENSMUST00000162574 396 ntBASIC2.84□□□□□ -1.95
Smarca1Q6PGB8 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Smarca1Q6PGB8 Gm28900-201ENSMUST00000185232 156 ntBASIC2.84□□□□□ -1.95
Smarca1Q6PGB8 Gm38041-201ENSMUST00000194445 661 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms