Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm18645-201ENSMUST00000209593 651 ntBASIC0.76□□□□□ -2.29
Nup98Q6PFD9 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC0.76□□□□□ -2.29
Nup98Q6PFD9 Gm19441-201ENSMUST00000221545 330 ntBASIC0.76□□□□□ -2.29
Nup98Q6PFD9 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.76□□□□□ -2.29
Nup98Q6PFD9 Gm22997-201ENSMUST00000082845 107 ntBASIC0.76□□□□□ -2.29
Nup98Q6PFD9 Gm11065-201ENSMUST00000111462 228 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm11784-201ENSMUST00000118568 474 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm14554-201ENSMUST00000119548 661 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm9001-201ENSMUST00000121642 399 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm25423-201ENSMUST00000157609 107 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm20630-201ENSMUST00000177387 551 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm26285-201ENSMUST00000177923 107 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm21744-201ENSMUST00000178403 662 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm29413-201ENSMUST00000186019 880 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm28700-201ENSMUST00000187614 579 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm29639-201ENSMUST00000188375 580 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm28843-201ENSMUST00000189198 678 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm29546-201ENSMUST00000191171 678 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm23622-201ENSMUST00000082460 107 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm42721-201ENSMUST00000197165 1523 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm24229-201ENSMUST00000158830 118 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm42623-201ENSMUST00000197225 379 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm23628-201ENSMUST00000082464 173 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 n-R5s37-201ENSMUST00000082533 118 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC0.75□□□□□ -2.29
Nup98Q6PFD9 Gm14980-201ENSMUST00000121247 736 ntBASIC0.74□□□□□ -2.29
Nup98Q6PFD9 Gm24476-201ENSMUST00000157437 131 ntBASIC0.74□□□□□ -2.29
Nup98Q6PFD9 Mir1967-201ENSMUST00000157789 82 ntBASIC0.74□□□□□ -2.29
Nup98Q6PFD9 Gm25333-201ENSMUST00000158035 246 ntBASIC0.74□□□□□ -2.29
Nup98Q6PFD9 Gm3025-201ENSMUST00000163454 489 ntBASIC0.74□□□□□ -2.29
Nup98Q6PFD9 Gm3111-201ENSMUST00000167426 490 ntBASIC0.74□□□□□ -2.29
Nup98Q6PFD9 Mir28b-201ENSMUST00000175399 80 ntBASIC0.74□□□□□ -2.29
Nup98Q6PFD9 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC0.74□□□□□ -2.29
Nup98Q6PFD9 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC0.74□□□□□ -2.29
Nup98Q6PFD9 Gm44301-201ENSMUST00000200362 143 ntBASIC0.74□□□□□ -2.29
Nup98Q6PFD9 Gm45616-201ENSMUST00000211711 319 ntBASIC0.74□□□□□ -2.29
Nup98Q6PFD9 Gm18729-201ENSMUST00000217230 621 ntBASIC0.74□□□□□ -2.29
Nup98Q6PFD9 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.74□□□□□ -2.29
Nup98Q6PFD9 Gm22265-201ENSMUST00000082947 116 ntBASIC0.74□□□□□ -2.29
Nup98Q6PFD9 Gm23466-201ENSMUST00000157133 106 ntBASIC0.73□□□□□ -2.29
Nup98Q6PFD9 Gm22098-201ENSMUST00000157930 85 ntBASIC0.73□□□□□ -2.29
Nup98Q6PFD9 Gm25020-201ENSMUST00000178071 107 ntBASIC0.73□□□□□ -2.29
Nup98Q6PFD9 Gm24100-201ENSMUST00000178592 79 ntBASIC0.73□□□□□ -2.29
Nup98Q6PFD9 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC0.73□□□□□ -2.29
Nup98Q6PFD9 Gm37568-201ENSMUST00000191755 364 ntBASIC0.73□□□□□ -2.29
Nup98Q6PFD9 Gm18691-201ENSMUST00000203593 872 ntBASIC0.73□□□□□ -2.29
Nup98Q6PFD9 Gm44654-201ENSMUST00000208052 329 ntBASIC0.73□□□□□ -2.29
Nup98Q6PFD9 AC123062.1-201ENSMUST00000221287 481 ntBASIC0.73□□□□□ -2.29
Nup98Q6PFD9 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.73□□□□□ -2.29
Nup98Q6PFD9 Gm11891-201ENSMUST00000121241 619 ntBASIC0.73□□□□□ -2.29
Nup98Q6PFD9 Gm24777-201ENSMUST00000157644 107 ntBASIC0.73□□□□□ -2.29
Nup98Q6PFD9 Gm23124-201ENSMUST00000157650 107 ntBASIC0.73□□□□□ -2.29
Nup98Q6PFD9 Gm22338-201ENSMUST00000157715 129 ntBASIC0.73□□□□□ -2.29
Nup98Q6PFD9 Gm26000-201ENSMUST00000157991 107 ntBASIC0.73□□□□□ -2.29
Nup98Q6PFD9 Gm26487-201ENSMUST00000158022 94 ntBASIC0.73□□□□□ -2.29
Nup98Q6PFD9 Gm6660-201ENSMUST00000179149 468 ntBASIC0.73□□□□□ -2.29
Nup98Q6PFD9 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC0.73□□□□□ -2.29
Nup98Q6PFD9 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC0.73□□□□□ -2.29
Nup98Q6PFD9 Gm19885-201ENSMUST00000212853 343 ntBASIC0.73□□□□□ -2.29
Nup98Q6PFD9 AC159709.1-201ENSMUST00000220445 349 ntBASIC0.73□□□□□ -2.29
Nup98Q6PFD9 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
Nup98Q6PFD9 Gm13482-201ENSMUST00000119842 254 ntBASIC0.72□□□□□ -2.29
Nup98Q6PFD9 Gm15878-201ENSMUST00000127561 306 ntBASIC0.72□□□□□ -2.29
Nup98Q6PFD9 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC0.72□□□□□ -2.29
Nup98Q6PFD9 Gm3333-202ENSMUST00000221763 1044 ntBASIC0.72□□□□□ -2.29
Nup98Q6PFD9 AC139294.2-201ENSMUST00000227159 285 ntBASIC0.72□□□□□ -2.29
Nup98Q6PFD9 CT025602.1-201ENSMUST00000227281 382 ntBASIC0.72□□□□□ -2.29
Nup98Q6PFD9 Gm25128-201ENSMUST00000083339 76 ntBASIC0.72□□□□□ -2.29
Nup98Q6PFD9 Gm25257-201ENSMUST00000083907 110 ntBASIC0.72□□□□□ -2.29
Nup98Q6PFD9 Gm23202-201ENSMUST00000104376 129 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Gm23907-201ENSMUST00000104595 189 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Gm12636-201ENSMUST00000117395 624 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Gm7429-201ENSMUST00000118664 348 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Gm13992-201ENSMUST00000120558 156 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Gm23339-201ENSMUST00000158962 139 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Gm3563-201ENSMUST00000172963 1628 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Gm27517-201ENSMUST00000184347 236 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Ighv12-1-201ENSMUST00000195542 329 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Gm43250-201ENSMUST00000196536 273 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Mir3961-201ENSMUST00000198795 59 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC0.71□□□□□ -2.3
Nup98Q6PFD9 AC173482.2-201ENSMUST00000224044 750 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Gm24258-201ENSMUST00000083739 133 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Gm11389-201ENSMUST00000121407 430 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Gm11392-201ENSMUST00000181419 710 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC0.71□□□□□ -2.3
Nup98Q6PFD9 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms