Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 AC116589.3-202ENSMUST00000221770 649 ntBASIC2.63□□□□□ -1.99
Trim27Q62158 AC116589.6-201ENSMUST00000222252 649 ntBASIC2.63□□□□□ -1.99
Trim27Q62158 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC2.63□□□□□ -1.99
Trim27Q62158 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.63□□□□□ -1.99
Trim27Q62158 Gm13378-201ENSMUST00000117483 336 ntBASIC2.62□□□□□ -1.99
Trim27Q62158 Gm12956-201ENSMUST00000122184 414 ntBASIC2.62□□□□□ -1.99
Trim27Q62158 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.62□□□□□ -1.99
Trim27Q62158 Gm23331-201ENSMUST00000157423 108 ntBASIC2.62□□□□□ -1.99
Trim27Q62158 Gm24857-201ENSMUST00000158061 310 ntBASIC2.62□□□□□ -1.99
Trim27Q62158 Gm24358-201ENSMUST00000158424 288 ntBASIC2.62□□□□□ -1.99
Trim27Q62158 Gm22664-201ENSMUST00000158719 105 ntBASIC2.62□□□□□ -1.99
Trim27Q62158 Mir7068-201ENSMUST00000183439 74 ntBASIC2.62□□□□□ -1.99
Trim27Q62158 Gm44477-201ENSMUST00000199661 110 ntBASIC2.62□□□□□ -1.99
Trim27Q62158 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC2.62□□□□□ -1.99
Trim27Q62158 Gm44128-201ENSMUST00000204909 219 ntBASIC2.62□□□□□ -1.99
Trim27Q62158 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC2.62□□□□□ -1.99
Trim27Q62158 Gm18991-201ENSMUST00000209225 746 ntBASIC2.62□□□□□ -1.99
Trim27Q62158 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
Trim27Q62158 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.62□□□□□ -1.99
Trim27Q62158 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.62□□□□□ -1.99
Trim27Q62158 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.62□□□□□ -1.99
Trim27Q62158 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Trim27Q62158 Gm25651-201ENSMUST00000083782 119 ntBASIC2.62□□□□□ -1.99
Trim27Q62158 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Trim27Q62158 Gm22656-201ENSMUST00000104199 171 ntBASIC2.61□□□□□ -1.99
Trim27Q62158 Gm14287-201ENSMUST00000121060 117 ntBASIC2.61□□□□□ -1.99
Trim27Q62158 Gm23641-201ENSMUST00000157857 101 ntBASIC2.61□□□□□ -1.99
Trim27Q62158 Gm24191-201ENSMUST00000157977 122 ntBASIC2.61□□□□□ -1.99
Trim27Q62158 Gm23016-201ENSMUST00000158431 62 ntBASIC2.61□□□□□ -1.99
Trim27Q62158 Snord11-201ENSMUST00000158468 84 ntBASIC2.61□□□□□ -1.99
Trim27Q62158 Gm28744-201ENSMUST00000189939 340 ntBASIC2.61□□□□□ -1.99
Trim27Q62158 Gm28927-201ENSMUST00000191528 272 ntBASIC2.61□□□□□ -1.99
Trim27Q62158 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.61□□□□□ -1.99
Trim27Q62158 Gm45375-201ENSMUST00000210338 280 ntBASIC2.61□□□□□ -1.99
Trim27Q62158 AC163357.1-201ENSMUST00000220847 233 ntBASIC2.61□□□□□ -1.99
Trim27Q62158 Gm46312-201ENSMUST00000220961 420 ntBASIC2.61□□□□□ -1.99
Trim27Q62158 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.61□□□□□ -1.99
Trim27Q62158 Gm26066-201ENSMUST00000083385 109 ntBASIC2.61□□□□□ -1.99
Trim27Q62158 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
Trim27Q62158 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Trim27Q62158 Gm11359-201ENSMUST00000120039 567 ntBASIC2.6□□□□□ -1.99
Trim27Q62158 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.6□□□□□ -1.99
Trim27Q62158 Gm24237-201ENSMUST00000157790 132 ntBASIC2.6□□□□□ -1.99
Trim27Q62158 Gm27510-201ENSMUST00000158214 64 ntBASIC2.6□□□□□ -1.99
Trim27Q62158 Gm22159-201ENSMUST00000158412 130 ntBASIC2.6□□□□□ -1.99
Trim27Q62158 Gm24577-201ENSMUST00000158580 63 ntBASIC2.6□□□□□ -1.99
Trim27Q62158 Gm26501-201ENSMUST00000178307 107 ntBASIC2.6□□□□□ -1.99
Trim27Q62158 Gm18971-201ENSMUST00000197240 374 ntBASIC2.6□□□□□ -1.99
Trim27Q62158 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.6□□□□□ -1.99
Trim27Q62158 AC158597.1-201ENSMUST00000216234 150 ntBASIC2.6□□□□□ -1.99
Trim27Q62158 AC157017.1-201ENSMUST00000220148 364 ntBASIC2.6□□□□□ -1.99
Trim27Q62158 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.6□□□□□ -1.99
Trim27Q62158 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.6□□□□□ -1.99
Trim27Q62158 Gm22353-201ENSMUST00000083918 136 ntBASIC2.6□□□□□ -1.99
Trim27Q62158 Gm42942-201ENSMUST00000196086 1328 ntBASIC2.6□□□□□ -1.99
Trim27Q62158 Gm24338-201ENSMUST00000104205 127 ntBASIC2.59□□□□□ -1.99
Trim27Q62158 Gm15030-201ENSMUST00000119804 484 ntBASIC2.59□□□□□ -1.99
Trim27Q62158 Gm25392-201ENSMUST00000157335 297 ntBASIC2.59□□□□□ -1.99
Trim27Q62158 Gm22535-201ENSMUST00000158174 119 ntBASIC2.59□□□□□ -1.99
Trim27Q62158 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.59□□□□□ -1.99
Trim27Q62158 Gm28740-201ENSMUST00000186142 215 ntBASIC2.59□□□□□ -1.99
Trim27Q62158 Gm29134-201ENSMUST00000186579 126 ntBASIC2.59□□□□□ -1.99
Trim27Q62158 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.59□□□□□ -1.99
Trim27Q62158 Gm28337-201ENSMUST00000190425 666 ntBASIC2.59□□□□□ -1.99
Trim27Q62158 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC2.59□□□□□ -1.99
Trim27Q62158 Gm42622-201ENSMUST00000197229 355 ntBASIC2.59□□□□□ -1.99
Trim27Q62158 Gm45445-201ENSMUST00000209586 232 ntBASIC2.59□□□□□ -1.99
Trim27Q62158 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.59□□□□□ -1.99
Trim27Q62158 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.59□□□□□ -1.99
Trim27Q62158 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trim27Q62158 Gm23614-201ENSMUST00000082598 107 ntBASIC2.59□□□□□ -1.99
Trim27Q62158 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
Trim27Q62158 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.59□□□□□ -2
Trim27Q62158 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trim27Q62158 Gm13672-201ENSMUST00000117554 459 ntBASIC2.58□□□□□ -2
Trim27Q62158 Gm11512-201ENSMUST00000119669 663 ntBASIC2.58□□□□□ -2
Trim27Q62158 Gm14215-201ENSMUST00000120578 221 ntBASIC2.58□□□□□ -2
Trim27Q62158 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC2.58□□□□□ -2
Trim27Q62158 Gm13153-201ENSMUST00000120969 637 ntBASIC2.58□□□□□ -2
Trim27Q62158 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC2.58□□□□□ -2
Trim27Q62158 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC2.58□□□□□ -2
Trim27Q62158 Gm17065-201ENSMUST00000165245 239 ntBASIC2.58□□□□□ -2
Trim27Q62158 Gm26430-201ENSMUST00000178054 107 ntBASIC2.58□□□□□ -2
Trim27Q62158 Mir8090-201ENSMUST00000185078 136 ntBASIC2.58□□□□□ -2
Trim27Q62158 Gm28925-201ENSMUST00000188586 168 ntBASIC2.58□□□□□ -2
Trim27Q62158 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.58□□□□□ -2
Trim27Q62158 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.58□□□□□ -2
Trim27Q62158 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.58□□□□□ -2
Trim27Q62158 Gm23246-201ENSMUST00000083371 67 ntBASIC2.58□□□□□ -2
Trim27Q62158 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Trim27Q62158 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.58□□□□□ -2
Trim27Q62158 Mir701-201ENSMUST00000102208 109 ntBASIC2.57□□□□□ -2
Trim27Q62158 Gm13475-201ENSMUST00000119290 234 ntBASIC2.57□□□□□ -2
Trim27Q62158 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.57□□□□□ -2
Trim27Q62158 Gm25054-201ENSMUST00000157370 97 ntBASIC2.57□□□□□ -2
Trim27Q62158 Mir6355-201ENSMUST00000183687 106 ntBASIC2.57□□□□□ -2
Trim27Q62158 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.57□□□□□ -2
Trim27Q62158 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC2.57□□□□□ -2
Trim27Q62158 Gm43978-201ENSMUST00000203491 451 ntBASIC2.57□□□□□ -2
Trim27Q62158 Gm18453-201ENSMUST00000208000 626 ntBASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms