Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm28939-201ENSMUST00000190351 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm28223-201ENSMUST00000190469 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm29575-201ENSMUST00000190597 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm29092-201ENSMUST00000190768 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm29469-201ENSMUST00000191448 315 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CtcfQ61164 Gm43901-201ENSMUST00000203247 453 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 AC163033.1-201ENSMUST00000218608 157 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.98□□□□□ -1.93
CtcfQ61164 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.98□□□□□ -1.93
CtcfQ61164 Gm25257-201ENSMUST00000083907 110 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CtcfQ61164 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CtcfQ61164 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC2.98□□□□□ -1.93
CtcfQ61164 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Gm25526-201ENSMUST00000104332 132 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Gm12785-201ENSMUST00000122052 172 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Gm24911-201ENSMUST00000157292 136 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Gm23668-201ENSMUST00000157465 111 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Gm23137-201ENSMUST00000157559 107 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Gm23588-201ENSMUST00000157659 99 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Gm26186-201ENSMUST00000157689 125 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Gm22330-201ENSMUST00000158068 115 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Gm23760-201ENSMUST00000158350 116 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Gm23380-201ENSMUST00000158448 103 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Gm25718-201ENSMUST00000158632 118 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Gm24862-201ENSMUST00000179103 79 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Gm23310-201ENSMUST00000179105 79 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Gm25461-201ENSMUST00000179293 79 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Mir6335-201ENSMUST00000184081 98 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Gm24350-202ENSMUST00000198309 132 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Gm44519-201ENSMUST00000206486 122 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 AC140477.1-201ENSMUST00000222354 246 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.97□□□□□ -1.93
CtcfQ61164 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CtcfQ61164 Gm22249-201ENSMUST00000082485 136 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Gm23451-201ENSMUST00000083328 122 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Gm23264-201ENSMUST00000083372 107 ntBASIC2.97□□□□□ -1.93
CtcfQ61164 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CtcfQ61164 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
CtcfQ61164 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CtcfQ61164 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
CtcfQ61164 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CtcfQ61164 Mir542-201ENSMUST00000102186 85 ntBASIC2.96□□□□□ -1.94
CtcfQ61164 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CtcfQ61164 Gm25308-201ENSMUST00000104171 158 ntBASIC2.96□□□□□ -1.94
CtcfQ61164 Gm24079-201ENSMUST00000104352 132 ntBASIC2.96□□□□□ -1.94
CtcfQ61164 Gm23911-201ENSMUST00000104596 134 ntBASIC2.96□□□□□ -1.94
CtcfQ61164 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
CtcfQ61164 Gm25539-201ENSMUST00000116886 122 ntBASIC2.96□□□□□ -1.94
CtcfQ61164 Gm26149-201ENSMUST00000157432 108 ntBASIC2.96□□□□□ -1.94
CtcfQ61164 Gm23120-201ENSMUST00000157654 287 ntBASIC2.96□□□□□ -1.94
CtcfQ61164 Gm26414-201ENSMUST00000157674 269 ntBASIC2.96□□□□□ -1.94
CtcfQ61164 Gm25362-201ENSMUST00000158854 105 ntBASIC2.96□□□□□ -1.94
CtcfQ61164 Gm16232-201ENSMUST00000162856 167 ntBASIC2.96□□□□□ -1.94
CtcfQ61164 Gm26501-201ENSMUST00000178307 107 ntBASIC2.96□□□□□ -1.94
CtcfQ61164 Gm20058-201ENSMUST00000186939 284 ntBASIC2.96□□□□□ -1.94
CtcfQ61164 Gm2719-201ENSMUST00000191929 444 ntBASIC2.96□□□□□ -1.94
CtcfQ61164 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.96□□□□□ -1.94
CtcfQ61164 Gm45288-201ENSMUST00000210236 151 ntBASIC2.96□□□□□ -1.94
CtcfQ61164 AC123803.1-201ENSMUST00000216093 189 ntBASIC2.96□□□□□ -1.94
CtcfQ61164 Gm10222-201ENSMUST00000088336 294 ntBASIC2.96□□□□□ -1.94
CtcfQ61164 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
CtcfQ61164 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CtcfQ61164 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CtcfQ61164 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.95□□□□□ -1.94
CtcfQ61164 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.95□□□□□ -1.94
CtcfQ61164 Gm25500-201ENSMUST00000104426 123 ntBASIC2.95□□□□□ -1.94
CtcfQ61164 Gm14296-202ENSMUST00000108931 750 ntBASIC2.95□□□□□ -1.94
CtcfQ61164 Gm15272-201ENSMUST00000120865 233 ntBASIC2.95□□□□□ -1.94
CtcfQ61164 Gm25280-201ENSMUST00000157269 101 ntBASIC2.95□□□□□ -1.94
CtcfQ61164 Gm22141-201ENSMUST00000157403 277 ntBASIC2.95□□□□□ -1.94
CtcfQ61164 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.95□□□□□ -1.94
CtcfQ61164 Gm28000-201ENSMUST00000184380 85 ntBASIC2.95□□□□□ -1.94
CtcfQ61164 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.95□□□□□ -1.94
CtcfQ61164 Gm45365-201ENSMUST00000209489 256 ntBASIC2.95□□□□□ -1.94
CtcfQ61164 Gm45313-201ENSMUST00000210584 178 ntBASIC2.95□□□□□ -1.94
CtcfQ61164 CT010454.1-201ENSMUST00000225975 265 ntBASIC2.95□□□□□ -1.94
CtcfQ61164 Rny1-201ENSMUST00000083767 112 ntBASIC2.95□□□□□ -1.94
CtcfQ61164 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CtcfQ61164 Mir496a-201ENSMUST00000093627 79 ntBASIC2.95□□□□□ -1.94
CtcfQ61164 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.95□□□□□ -1.94
CtcfQ61164 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CtcfQ61164 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CtcfQ61164 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CtcfQ61164 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CtcfQ61164 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.94□□□□□ -1.94
CtcfQ61164 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CtcfQ61164 Mir875-201ENSMUST00000104698 78 ntBASIC2.94□□□□□ -1.94
CtcfQ61164 Gm13396-201ENSMUST00000120617 271 ntBASIC2.94□□□□□ -1.94
CtcfQ61164 Gm13903-201ENSMUST00000120945 193 ntBASIC2.94□□□□□ -1.94
CtcfQ61164 Gm24436-201ENSMUST00000157889 302 ntBASIC2.94□□□□□ -1.94
CtcfQ61164 Gm25643-201ENSMUST00000158874 103 ntBASIC2.94□□□□□ -1.94
CtcfQ61164 Gm8114-201ENSMUST00000172225 484 ntBASIC2.94□□□□□ -1.94
CtcfQ61164 Gm25707-201ENSMUST00000175120 96 ntBASIC2.94□□□□□ -1.94
CtcfQ61164 Gm28647-201ENSMUST00000188416 197 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms