Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Gm43680-201ENSMUST00000199466 340 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 Gm44794-201ENSMUST00000206550 411 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC1.82□□□□□ -2.12
Usf1Q61069 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.82□□□□□ -2.12
Usf1Q61069 AC154521.1-201ENSMUST00000222635 330 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 Gm22683-201ENSMUST00000082854 137 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 Gm22353-201ENSMUST00000083918 136 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Usf1Q61069 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.82□□□□□ -2.12
Usf1Q61069 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
Usf1Q61069 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Usf1Q61069 Gm15844-201ENSMUST00000118016 576 ntBASIC1.81□□□□□ -2.12
Usf1Q61069 Gm13720-201ENSMUST00000120741 196 ntBASIC1.81□□□□□ -2.12
Usf1Q61069 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC1.81□□□□□ -2.12
Usf1Q61069 Gm28597-201ENSMUST00000187664 666 ntBASIC1.81□□□□□ -2.12
Usf1Q61069 Trbv18-201ENSMUST00000194256 294 ntBASIC1.81□□□□□ -2.12
Usf1Q61069 Gm9402-201ENSMUST00000196849 388 ntBASIC1.81□□□□□ -2.12
Usf1Q61069 Gm43676-201ENSMUST00000197532 540 ntBASIC1.81□□□□□ -2.12
Usf1Q61069 Mir691-201ENSMUST00000199719 78 ntBASIC1.81□□□□□ -2.12
Usf1Q61069 Gm18854-201ENSMUST00000211196 329 ntBASIC1.81□□□□□ -2.12
Usf1Q61069 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.81□□□□□ -2.12
Usf1Q61069 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.81□□□□□ -2.12
Usf1Q61069 Gm25853-201ENSMUST00000082793 132 ntBASIC1.81□□□□□ -2.12
Usf1Q61069 Gm26328-201ENSMUST00000082821 107 ntBASIC1.81□□□□□ -2.12
Usf1Q61069 Gm25794-201ENSMUST00000083286 107 ntBASIC1.81□□□□□ -2.12
Usf1Q61069 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Usf1Q61069 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Usf1Q61069 Gm14215-201ENSMUST00000120578 221 ntBASIC1.8□□□□□ -2.12
Usf1Q61069 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.8□□□□□ -2.12
Usf1Q61069 Gm23469-201ENSMUST00000157131 104 ntBASIC1.8□□□□□ -2.12
Usf1Q61069 Gm23641-201ENSMUST00000157857 101 ntBASIC1.8□□□□□ -2.12
Usf1Q61069 Gm25488-201ENSMUST00000158728 118 ntBASIC1.8□□□□□ -2.12
Usf1Q61069 Gm26004-201ENSMUST00000158804 116 ntBASIC1.8□□□□□ -2.12
Usf1Q61069 Gm25020-201ENSMUST00000178071 107 ntBASIC1.8□□□□□ -2.12
Usf1Q61069 Gm21978-201ENSMUST00000179696 377 ntBASIC1.8□□□□□ -2.12
Usf1Q61069 Mir7679-201ENSMUST00000183379 63 ntBASIC1.8□□□□□ -2.12
Usf1Q61069 Gm27385-201ENSMUST00000184747 104 ntBASIC1.8□□□□□ -2.12
Usf1Q61069 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.8□□□□□ -2.12
Usf1Q61069 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.8□□□□□ -2.12
Usf1Q61069 Igkv13-76-201ENSMUST00000197621 347 ntBASIC1.8□□□□□ -2.12
Usf1Q61069 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.8□□□□□ -2.12
Usf1Q61069 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.8□□□□□ -2.12
Usf1Q61069 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.8□□□□□ -2.12
Usf1Q61069 AC114010.1-201ENSMUST00000222060 379 ntBASIC1.8□□□□□ -2.12
Usf1Q61069 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.8□□□□□ -2.12
Usf1Q61069 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Usf1Q61069 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Usf1Q61069 Gm25832-201ENSMUST00000104140 130 ntBASIC1.79□□□□□ -2.12
Usf1Q61069 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Usf1Q61069 Gm14293-201ENSMUST00000118528 577 ntBASIC1.79□□□□□ -2.12
Usf1Q61069 Gm12304-201ENSMUST00000120312 385 ntBASIC1.79□□□□□ -2.12
Usf1Q61069 Gm14530-201ENSMUST00000122391 333 ntBASIC1.79□□□□□ -2.12
Usf1Q61069 Gm23381-201ENSMUST00000157676 94 ntBASIC1.79□□□□□ -2.12
Usf1Q61069 Gm25711-201ENSMUST00000158633 128 ntBASIC1.79□□□□□ -2.12
Usf1Q61069 Gm23342-201ENSMUST00000158958 115 ntBASIC1.79□□□□□ -2.12
Usf1Q61069 Gm7925-201ENSMUST00000166690 401 ntBASIC1.79□□□□□ -2.12
Usf1Q61069 Gm43487-201ENSMUST00000200331 1031 ntBASIC1.79□□□□□ -2.12
Usf1Q61069 AC153529.1-201ENSMUST00000217818 370 ntBASIC1.79□□□□□ -2.12
Usf1Q61069 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Usf1Q61069 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.79□□□□□ -2.12
Usf1Q61069 Gm19441-201ENSMUST00000221545 330 ntBASIC1.79□□□□□ -2.12
Usf1Q61069 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Usf1Q61069 Gm26265-201ENSMUST00000083277 135 ntBASIC1.79□□□□□ -2.12
Usf1Q61069 Mir30d-201ENSMUST00000083503 82 ntBASIC1.79□□□□□ -2.12
Usf1Q61069 Gm22577-201ENSMUST00000083731 109 ntBASIC1.79□□□□□ -2.12
Usf1Q61069 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Usf1Q61069 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
Usf1Q61069 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Usf1Q61069 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
Usf1Q61069 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
Usf1Q61069 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC1.78□□□□□ -2.12
Usf1Q61069 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC1.78□□□□□ -2.12
Usf1Q61069 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC1.78□□□□□ -2.12
Usf1Q61069 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.78□□□□□ -2.12
Usf1Q61069 Trav5n-3-201ENSMUST00000164511 270 ntBASIC1.78□□□□□ -2.12
Usf1Q61069 Gm23267-201ENSMUST00000178490 132 ntBASIC1.78□□□□□ -2.12
Usf1Q61069 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Usf1Q61069 Gm23523-201ENSMUST00000180190 107 ntBASIC1.78□□□□□ -2.12
Usf1Q61069 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Usf1Q61069 Mir7678-201ENSMUST00000185076 71 ntBASIC1.78□□□□□ -2.12
Usf1Q61069 Gm18356-201ENSMUST00000185677 623 ntBASIC1.78□□□□□ -2.12
Usf1Q61069 Gm18971-201ENSMUST00000197240 374 ntBASIC1.78□□□□□ -2.12
Usf1Q61069 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.78□□□□□ -2.12
Usf1Q61069 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.78□□□□□ -2.12
Usf1Q61069 Gm45730-201ENSMUST00000212560 395 ntBASIC1.78□□□□□ -2.12
Usf1Q61069 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.78□□□□□ -2.12
Usf1Q61069 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.78□□□□□ -2.12
Usf1Q61069 Gm18113-201ENSMUST00000220630 303 ntBASIC1.78□□□□□ -2.12
Usf1Q61069 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.78□□□□□ -2.12
Usf1Q61069 Gm25124-201ENSMUST00000083345 164 ntBASIC1.78□□□□□ -2.12
Usf1Q61069 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
Usf1Q61069 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.78□□□□□ -2.12
Usf1Q61069 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.78□□□□□ -2.13
Usf1Q61069 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.78□□□□□ -2.13
Usf1Q61069 Gm12225-201ENSMUST00000117995 298 ntBASIC1.77□□□□□ -2.13
Usf1Q61069 Gm12646-201ENSMUST00000119144 238 ntBASIC1.77□□□□□ -2.13
Usf1Q61069 Gm23813-201ENSMUST00000175153 77 ntBASIC1.77□□□□□ -2.13
Usf1Q61069 Gm29350-201ENSMUST00000189141 541 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 129.9 ms