Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 AC162934.1-201ENSMUST00000222880 309 ntBASIC5□□□□□ -1.61
Scaf1Q5U4C3 Gm22299-201ENSMUST00000082663 136 ntBASIC5□□□□□ -1.61
Scaf1Q5U4C3 Gm25205-201ENSMUST00000082841 103 ntBASIC5□□□□□ -1.61
Scaf1Q5U4C3 n-R5s166-201ENSMUST00000082898 121 ntBASIC5□□□□□ -1.61
Scaf1Q5U4C3 Mir193a-201ENSMUST00000083461 66 ntBASIC5□□□□□ -1.61
Scaf1Q5U4C3 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Scaf1Q5U4C3 AC117199.1-201ENSMUST00000219940 3132 ntBASIC5□□□□□ -1.61
Scaf1Q5U4C3 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Scaf1Q5U4C3 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Scaf1Q5U4C3 Gm38382-201ENSMUST00000193790 2499 ntBASIC5□□□□□ -1.61
Scaf1Q5U4C3 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
Scaf1Q5U4C3 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Scaf1Q5U4C3 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Scaf1Q5U4C3 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Scaf1Q5U4C3 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC4.99□□□□□ -1.61
Scaf1Q5U4C3 Mir1967-201ENSMUST00000157789 82 ntBASIC4.99□□□□□ -1.61
Scaf1Q5U4C3 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Scaf1Q5U4C3 Gm22348-201ENSMUST00000178674 79 ntBASIC4.99□□□□□ -1.61
Scaf1Q5U4C3 Mir6715-201ENSMUST00000184990 57 ntBASIC4.99□□□□□ -1.61
Scaf1Q5U4C3 Trbv18-201ENSMUST00000194256 294 ntBASIC4.99□□□□□ -1.61
Scaf1Q5U4C3 Gm43901-201ENSMUST00000203247 453 ntBASIC4.99□□□□□ -1.61
Scaf1Q5U4C3 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC4.99□□□□□ -1.61
Scaf1Q5U4C3 AC100590.2-201ENSMUST00000219028 215 ntBASIC4.99□□□□□ -1.61
Scaf1Q5U4C3 AC158982.2-201ENSMUST00000226283 184 ntBASIC4.99□□□□□ -1.61
Scaf1Q5U4C3 Gm24147-201ENSMUST00000082763 144 ntBASIC4.99□□□□□ -1.61
Scaf1Q5U4C3 Mir101b-201ENSMUST00000083622 97 ntBASIC4.99□□□□□ -1.61
Scaf1Q5U4C3 Gm45039-201ENSMUST00000209181 3477 ntBASIC4.99□□□□□ -1.61
Scaf1Q5U4C3 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Scaf1Q5U4C3 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Scaf1Q5U4C3 Gm22270-201ENSMUST00000104034 132 ntBASIC4.98□□□□□ -1.61
Scaf1Q5U4C3 Defa-ps9-201ENSMUST00000118264 276 ntBASIC4.98□□□□□ -1.61
Scaf1Q5U4C3 Gm24898-201ENSMUST00000158133 106 ntBASIC4.98□□□□□ -1.61
Scaf1Q5U4C3 Gm24314-201ENSMUST00000158274 123 ntBASIC4.98□□□□□ -1.61
Scaf1Q5U4C3 Gm26928-201ENSMUST00000182674 572 ntBASIC4.98□□□□□ -1.61
Scaf1Q5U4C3 Mir6408-201ENSMUST00000183643 91 ntBASIC4.98□□□□□ -1.61
Scaf1Q5U4C3 Gm29005-201ENSMUST00000186773 320 ntBASIC4.98□□□□□ -1.61
Scaf1Q5U4C3 AC154213.2-201ENSMUST00000227138 187 ntBASIC4.98□□□□□ -1.61
Scaf1Q5U4C3 Gm23039-201ENSMUST00000083870 161 ntBASIC4.98□□□□□ -1.61
Scaf1Q5U4C3 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Scaf1Q5U4C3 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Scaf1Q5U4C3 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Scaf1Q5U4C3 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Scaf1Q5U4C3 Gm7470-201ENSMUST00000194219 2095 ntBASIC4.98□□□□□ -1.61
Scaf1Q5U4C3 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Scaf1Q5U4C3 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.98□□□□□ -1.61
Scaf1Q5U4C3 Gm25764-201ENSMUST00000104092 134 ntBASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 Gm22713-201ENSMUST00000116895 130 ntBASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 Gm22310-201ENSMUST00000157509 116 ntBASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 Gm24730-201ENSMUST00000158228 117 ntBASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 Gm22767-201ENSMUST00000158365 165 ntBASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 Gm17117-201ENSMUST00000163665 299 ntBASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 Gm22192-201ENSMUST00000175128 85 ntBASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 Gm37997-201ENSMUST00000193515 267 ntBASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 Gm43239-201ENSMUST00000200131 201 ntBASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 AC158597.1-201ENSMUST00000216234 150 ntBASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 AC138401.2-201ENSMUST00000220461 365 ntBASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 Gm25632-201ENSMUST00000083112 85 ntBASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 Gm24163-201ENSMUST00000093660 132 ntBASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 AC153526.2-201ENSMUST00000218206 2031 ntBASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 Gm42481-201ENSMUST00000196822 2178 ntBASIC4.97□□□□□ -1.61
Scaf1Q5U4C3 Gm6829-201ENSMUST00000119858 360 ntBASIC4.96□□□□□ -1.62
Scaf1Q5U4C3 Gm12897-201ENSMUST00000120341 250 ntBASIC4.96□□□□□ -1.62
Scaf1Q5U4C3 Ear-ps8-201ENSMUST00000161935 354 ntBASIC4.96□□□□□ -1.62
Scaf1Q5U4C3 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC4.96□□□□□ -1.62
Scaf1Q5U4C3 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC4.96□□□□□ -1.62
Scaf1Q5U4C3 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Scaf1Q5U4C3 Gm44824-201ENSMUST00000207021 229 ntBASIC4.96□□□□□ -1.62
Scaf1Q5U4C3 AC098718.2-201ENSMUST00000226822 285 ntBASIC4.96□□□□□ -1.62
Scaf1Q5U4C3 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
Scaf1Q5U4C3 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC4.96□□□□□ -1.62
Scaf1Q5U4C3 Vmn1r174-202ENSMUST00000228331 9058 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
Scaf1Q5U4C3 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
Scaf1Q5U4C3 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC4.95□□□□□ -1.62
Scaf1Q5U4C3 Gm13076-201ENSMUST00000118041 204 ntBASIC4.95□□□□□ -1.62
Scaf1Q5U4C3 Gm23755-201ENSMUST00000157578 343 ntBASIC4.95□□□□□ -1.62
Scaf1Q5U4C3 Gm25860-201ENSMUST00000158252 126 ntBASIC4.95□□□□□ -1.62
Scaf1Q5U4C3 AC154297.1-201ENSMUST00000171334 397 ntBASIC4.95□□□□□ -1.62
Scaf1Q5U4C3 Gm24388-201ENSMUST00000177872 107 ntBASIC4.95□□□□□ -1.62
Scaf1Q5U4C3 Gm37617-201ENSMUST00000194309 159 ntBASIC4.95□□□□□ -1.62
Scaf1Q5U4C3 AC124746.2-201ENSMUST00000226594 427 ntBASIC4.95□□□□□ -1.62
Scaf1Q5U4C3 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4.95□□□□□ -1.62
Scaf1Q5U4C3 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Scaf1Q5U4C3 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Scaf1Q5U4C3 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
Scaf1Q5U4C3 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.94□□□□□ -1.62
Scaf1Q5U4C3 Gm25421-201ENSMUST00000104218 164 ntBASIC4.94□□□□□ -1.62
Scaf1Q5U4C3 Gm22097-201ENSMUST00000157929 278 ntBASIC4.94□□□□□ -1.62
Scaf1Q5U4C3 Igkv1-108-201ENSMUST00000198926 298 ntBASIC4.94□□□□□ -1.62
Scaf1Q5U4C3 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC4.94□□□□□ -1.62
Scaf1Q5U4C3 AC188459.1-201ENSMUST00000216651 300 ntBASIC4.94□□□□□ -1.62
Scaf1Q5U4C3 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.94□□□□□ -1.62
Scaf1Q5U4C3 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.94□□□□□ -1.62
Scaf1Q5U4C3 Gm22978-201ENSMUST00000082607 160 ntBASIC4.94□□□□□ -1.62
Scaf1Q5U4C3 Gm42448-201ENSMUST00000197122 2644 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 114.6 ms