Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC0.31□□□□□ -2.36
Trav3-1Q5R1I8 Gm24969-201ENSMUST00000180331 79 ntBASIC0.31□□□□□ -2.36
Trav3-1Q5R1I8 Gm43432-201ENSMUST00000196352 121 ntBASIC0.31□□□□□ -2.36
Trav3-1Q5R1I8 Gm44465-201ENSMUST00000199536 114 ntBASIC0.31□□□□□ -2.36
Trav3-1Q5R1I8 Gm44655-201ENSMUST00000207768 423 ntBASIC0.31□□□□□ -2.36
Trav3-1Q5R1I8 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.31□□□□□ -2.36
Trav3-1Q5R1I8 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
Trav3-1Q5R1I8 AL590614.1-201ENSMUST00000226037 268 ntBASIC0.31□□□□□ -2.36
Trav3-1Q5R1I8 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
Trav3-1Q5R1I8 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.31□□□□□ -2.36
Trav3-1Q5R1I8 Mir29b-2-201ENSMUST00000083478 81 ntBASIC0.31□□□□□ -2.36
Trav3-1Q5R1I8 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
Trav3-1Q5R1I8 Mir1195-201ENSMUST00000116818 98 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 AA413626-201ENSMUST00000121125 494 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gm25325-201ENSMUST00000122559 86 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 n-R5s150-201ENSMUST00000122705 108 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gm24896-201ENSMUST00000122741 135 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gm24480-201ENSMUST00000157442 103 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gm22522-201ENSMUST00000158271 151 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gm23419-201ENSMUST00000175523 84 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Mir7226-201ENSMUST00000184953 60 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gm28560-201ENSMUST00000186091 315 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gm28334-201ENSMUST00000186653 315 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gm28495-201ENSMUST00000188452 315 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gm28232-201ENSMUST00000188683 315 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gm28481-201ENSMUST00000189231 315 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gm9156-201ENSMUST00000189660 463 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gm29059-201ENSMUST00000191534 315 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gm37765-201ENSMUST00000192395 315 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gm37237-201ENSMUST00000192893 315 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gm36968-201ENSMUST00000193737 315 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gm38290-201ENSMUST00000195238 315 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gm43512-201ENSMUST00000198495 176 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gm45150-201ENSMUST00000206051 467 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Gm44844-201ENSMUST00000207242 336 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Mir33-201ENSMUST00000083531 69 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Mir27b-201ENSMUST00000083541 73 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 AC124426.1-203ENSMUST00000221814 1362 ntBASIC0.3□□□□□ -2.36
Trav3-1Q5R1I8 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm16265-201ENSMUST00000134558 108 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm26102-201ENSMUST00000157251 284 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm25371-201ENSMUST00000158162 101 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm26405-201ENSMUST00000158495 100 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm25768-201ENSMUST00000158570 98 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm25166-201ENSMUST00000158909 111 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Mir3109-201ENSMUST00000175301 88 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Mir6986-201ENSMUST00000184483 58 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm28110-201ENSMUST00000185782 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm29057-201ENSMUST00000186468 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm28737-201ENSMUST00000186808 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm29147-201ENSMUST00000186846 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm29118-201ENSMUST00000186908 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm28433-201ENSMUST00000187085 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm29227-201ENSMUST00000187139 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm28759-201ENSMUST00000187621 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm28831-201ENSMUST00000187739 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm28200-201ENSMUST00000187778 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm29034-201ENSMUST00000188099 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm28752-201ENSMUST00000188340 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm28474-201ENSMUST00000188501 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm29378-201ENSMUST00000188723 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm28569-201ENSMUST00000188748 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm28120-201ENSMUST00000188812 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm28369-201ENSMUST00000188993 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm28537-201ENSMUST00000189026 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm28909-201ENSMUST00000189406 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm28861-201ENSMUST00000189681 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm28717-201ENSMUST00000189950 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm29180-201ENSMUST00000190003 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm29575-201ENSMUST00000190597 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm29631-201ENSMUST00000191065 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm28160-201ENSMUST00000191229 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm29469-201ENSMUST00000191448 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm37658-201ENSMUST00000192672 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm37599-201ENSMUST00000193067 489 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm37129-201ENSMUST00000195791 315 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm44462-201ENSMUST00000199696 129 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm23452-201ENSMUST00000083327 107 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.29□□□□□ -2.36
Trav3-1Q5R1I8 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC0.28□□□□□ -2.36
Trav3-1Q5R1I8 Gm22713-201ENSMUST00000116895 130 ntBASIC0.28□□□□□ -2.36
Trav3-1Q5R1I8 Gm16412-201ENSMUST00000121602 273 ntBASIC0.28□□□□□ -2.36
Trav3-1Q5R1I8 Gm25392-201ENSMUST00000157335 297 ntBASIC0.28□□□□□ -2.36
Trav3-1Q5R1I8 Gm24668-201ENSMUST00000158935 104 ntBASIC0.28□□□□□ -2.36
Trav3-1Q5R1I8 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
Trav3-1Q5R1I8 Gm23636-201ENSMUST00000175070 95 ntBASIC0.28□□□□□ -2.36
Trav3-1Q5R1I8 Gm25642-201ENSMUST00000175137 66 ntBASIC0.28□□□□□ -2.36
Trav3-1Q5R1I8 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.28□□□□□ -2.36
Trav3-1Q5R1I8 Mir6364-201ENSMUST00000183396 86 ntBASIC0.28□□□□□ -2.36
Trav3-1Q5R1I8 Gm37579-201ENSMUST00000194291 142 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms