Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm38388-201ENSMUST00000195569 1430 ntBASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Gm18360-201ENSMUST00000173327 1524 ntBASIC0.94□□□□□ -2.26
Trav5d-4Q5R1F6 Gm43960-201ENSMUST00000204249 5020 ntBASIC0.93□□□□□ -2.26
Trav5d-4Q5R1F6 Mir343-201ENSMUST00000102360 75 ntBASIC0.93□□□□□ -2.26
Trav5d-4Q5R1F6 Mir467h-201ENSMUST00000116759 121 ntBASIC0.93□□□□□ -2.26
Trav5d-4Q5R1F6 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC0.93□□□□□ -2.26
Trav5d-4Q5R1F6 Gm26363-201ENSMUST00000158866 83 ntBASIC0.93□□□□□ -2.26
Trav5d-4Q5R1F6 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC0.93□□□□□ -2.26
Trav5d-4Q5R1F6 Gm21738-201ENSMUST00000177817 681 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Trav5d-4Q5R1F6 Gm16399-201ENSMUST00000181423 219 ntBASIC0.93□□□□□ -2.26
Trav5d-4Q5R1F6 Mir6381-201ENSMUST00000183426 87 ntBASIC0.93□□□□□ -2.26
Trav5d-4Q5R1F6 Igkv15-102-201ENSMUST00000197885 287 ntBASIC0.93□□□□□ -2.26
Trav5d-4Q5R1F6 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC0.93□□□□□ -2.26
Trav5d-4Q5R1F6 Gm43199-201ENSMUST00000200019 307 ntBASIC0.93□□□□□ -2.26
Trav5d-4Q5R1F6 Gm43531-201ENSMUST00000200676 1114 ntBASIC0.93□□□□□ -2.26
Trav5d-4Q5R1F6 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.93□□□□□ -2.26
Trav5d-4Q5R1F6 AC163357.1-201ENSMUST00000220847 233 ntBASIC0.93□□□□□ -2.26
Trav5d-4Q5R1F6 Gm22575-201ENSMUST00000082981 110 ntBASIC0.93□□□□□ -2.26
Trav5d-4Q5R1F6 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Trav5d-4Q5R1F6 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC0.93□□□□□ -2.26
Trav5d-4Q5R1F6 Defa-ps8-201ENSMUST00000120972 279 ntBASIC0.92□□□□□ -2.26
Trav5d-4Q5R1F6 Gm23206-201ENSMUST00000122720 184 ntBASIC0.92□□□□□ -2.26
Trav5d-4Q5R1F6 Gm22038-201ENSMUST00000157277 242 ntBASIC0.92□□□□□ -2.26
Trav5d-4Q5R1F6 Gm25423-201ENSMUST00000157609 107 ntBASIC0.92□□□□□ -2.26
Trav5d-4Q5R1F6 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC0.92□□□□□ -2.26
Trav5d-4Q5R1F6 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.92□□□□□ -2.26
Trav5d-4Q5R1F6 Gm27419-201ENSMUST00000184576 109 ntBASIC0.92□□□□□ -2.26
Trav5d-4Q5R1F6 Gm31520-201ENSMUST00000203048 733 ntBASIC0.92□□□□□ -2.26
Trav5d-4Q5R1F6 Gm21089-201ENSMUST00000215843 325 ntBASIC0.92□□□□□ -2.26
Trav5d-4Q5R1F6 Gm46993-201ENSMUST00000220708 259 ntBASIC0.92□□□□□ -2.26
Trav5d-4Q5R1F6 AC168880.1-201ENSMUST00000225113 707 ntBASIC0.92□□□□□ -2.26
Trav5d-4Q5R1F6 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC0.92□□□□□ -2.26
Trav5d-4Q5R1F6 Gm10092-201ENSMUST00000077110 180 ntBASIC0.92□□□□□ -2.26
Trav5d-4Q5R1F6 Mir219a-2-201ENSMUST00000083551 97 ntBASIC0.92□□□□□ -2.26
Trav5d-4Q5R1F6 BC022960-201ENSMUST00000119987 1815 ntBASIC0.92□□□□□ -2.26
Trav5d-4Q5R1F6 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Trav5d-4Q5R1F6 Gm15175-201ENSMUST00000117629 132 ntBASIC0.91□□□□□ -2.26
Trav5d-4Q5R1F6 Gm14624-201ENSMUST00000117746 192 ntBASIC0.91□□□□□ -2.26
Trav5d-4Q5R1F6 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC0.91□□□□□ -2.26
Trav5d-4Q5R1F6 Gm23078-201ENSMUST00000157848 148 ntBASIC0.91□□□□□ -2.26
Trav5d-4Q5R1F6 Gm22764-201ENSMUST00000158370 92 ntBASIC0.91□□□□□ -2.26
Trav5d-4Q5R1F6 Gm26213-201ENSMUST00000158582 110 ntBASIC0.91□□□□□ -2.26
Trav5d-4Q5R1F6 Gm25365-201ENSMUST00000158852 121 ntBASIC0.91□□□□□ -2.26
Trav5d-4Q5R1F6 Gm22129-201ENSMUST00000179034 107 ntBASIC0.91□□□□□ -2.26
Trav5d-4Q5R1F6 Mir7675-201ENSMUST00000184262 58 ntBASIC0.91□□□□□ -2.26
Trav5d-4Q5R1F6 Gm28995-201ENSMUST00000186625 261 ntBASIC0.91□□□□□ -2.26
Trav5d-4Q5R1F6 Gm43680-201ENSMUST00000199466 340 ntBASIC0.91□□□□□ -2.26
Trav5d-4Q5R1F6 AC154552.7-201ENSMUST00000222824 156 ntBASIC0.91□□□□□ -2.26
Trav5d-4Q5R1F6 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.91□□□□□ -2.26
Trav5d-4Q5R1F6 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Trav5d-4Q5R1F6 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
Trav5d-4Q5R1F6 Gm26263-201ENSMUST00000083281 164 ntBASIC0.91□□□□□ -2.26
Trav5d-4Q5R1F6 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC0.91□□□□□ -2.26
Trav5d-4Q5R1F6 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC0.91□□□□□ -2.26
Trav5d-4Q5R1F6 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.26
Trav5d-4Q5R1F6 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
Trav5d-4Q5R1F6 Mir1904-201ENSMUST00000122702 80 ntBASIC0.9□□□□□ -2.27
Trav5d-4Q5R1F6 Gm22885-201ENSMUST00000157410 107 ntBASIC0.9□□□□□ -2.27
Trav5d-4Q5R1F6 Gm24784-201ENSMUST00000157640 62 ntBASIC0.9□□□□□ -2.27
Trav5d-4Q5R1F6 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC0.9□□□□□ -2.27
Trav5d-4Q5R1F6 Gm7258-201ENSMUST00000179317 300 ntBASIC0.9□□□□□ -2.27
Trav5d-4Q5R1F6 Gm29216-201ENSMUST00000187117 492 ntBASIC0.9□□□□□ -2.27
Trav5d-4Q5R1F6 Ighv1-32-201ENSMUST00000195149 351 ntBASIC0.9□□□□□ -2.27
Trav5d-4Q5R1F6 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC0.9□□□□□ -2.27
Trav5d-4Q5R1F6 Gm17911-201ENSMUST00000210806 877 ntBASIC0.9□□□□□ -2.27
Trav5d-4Q5R1F6 Gm45907-201ENSMUST00000213023 193 ntBASIC0.9□□□□□ -2.27
Trav5d-4Q5R1F6 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.9□□□□□ -2.27
Trav5d-4Q5R1F6 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC0.9□□□□□ -2.27
Trav5d-4Q5R1F6 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.9□□□□□ -2.27
Trav5d-4Q5R1F6 AC112935.1-201ENSMUST00000227603 250 ntBASIC0.9□□□□□ -2.27
Trav5d-4Q5R1F6 Snord96a-201ENSMUST00000082791 81 ntBASIC0.9□□□□□ -2.27
Trav5d-4Q5R1F6 Gm22005-201ENSMUST00000082795 141 ntBASIC0.9□□□□□ -2.27
Trav5d-4Q5R1F6 Gm23102-201ENSMUST00000083724 116 ntBASIC0.9□□□□□ -2.27
Trav5d-4Q5R1F6 Gm24777-201ENSMUST00000157644 107 ntBASIC0.89□□□□□ -2.27
Trav5d-4Q5R1F6 Gm23387-201ENSMUST00000158586 107 ntBASIC0.89□□□□□ -2.27
Trav5d-4Q5R1F6 Gm17154-201ENSMUST00000165748 431 ntBASIC0.89□□□□□ -2.27
Trav5d-4Q5R1F6 Gm23967-201ENSMUST00000175062 78 ntBASIC0.89□□□□□ -2.27
Trav5d-4Q5R1F6 Mir7091-201ENSMUST00000184075 79 ntBASIC0.89□□□□□ -2.27
Trav5d-4Q5R1F6 Gm38146-201ENSMUST00000194121 1293 ntBASIC0.89□□□□□ -2.27
Trav5d-4Q5R1F6 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
Trav5d-4Q5R1F6 Gm34139-201ENSMUST00000196166 294 ntBASIC0.89□□□□□ -2.27
Trav5d-4Q5R1F6 Gm43911-201ENSMUST00000203097 76 ntBASIC0.89□□□□□ -2.27
Trav5d-4Q5R1F6 Gm44336-201ENSMUST00000203696 468 ntBASIC0.89□□□□□ -2.27
Trav5d-4Q5R1F6 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC0.89□□□□□ -2.27
Trav5d-4Q5R1F6 Mir22-201ENSMUST00000083595 95 ntBASIC0.89□□□□□ -2.27
Trav5d-4Q5R1F6 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC0.89□□□□□ -2.27
Trav5d-4Q5R1F6 AC133934.2-201ENSMUST00000221729 4129 ntBASIC0.88□□□□□ -2.27
Trav5d-4Q5R1F6 Gm14366-201ENSMUST00000121970 730 ntBASIC0.88□□□□□ -2.27
Trav5d-4Q5R1F6 Gm15365-201ENSMUST00000122392 300 ntBASIC0.88□□□□□ -2.27
Trav5d-4Q5R1F6 Gm24598-201ENSMUST00000122510 74 ntBASIC0.88□□□□□ -2.27
Trav5d-4Q5R1F6 Gm22136-201ENSMUST00000158751 268 ntBASIC0.88□□□□□ -2.27
Trav5d-4Q5R1F6 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
Trav5d-4Q5R1F6 Gm23636-201ENSMUST00000175070 95 ntBASIC0.88□□□□□ -2.27
Trav5d-4Q5R1F6 Gm23090-201ENSMUST00000177331 78 ntBASIC0.88□□□□□ -2.27
Trav5d-4Q5R1F6 Mir7665-201ENSMUST00000184907 63 ntBASIC0.88□□□□□ -2.27
Trav5d-4Q5R1F6 Gm28412-201ENSMUST00000187243 177 ntBASIC0.88□□□□□ -2.27
Trav5d-4Q5R1F6 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC0.88□□□□□ -2.27
Trav5d-4Q5R1F6 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.88□□□□□ -2.27
Trav5d-4Q5R1F6 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC0.88□□□□□ -2.27
Retrieved 100 of 76,532 protein–RNA pairs in 104.1 ms