Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm45240-201ENSMUST00000211437 674 ntBASIC1.91□□□□□ -2.1
Usp28Q5I043 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.91□□□□□ -2.1
Usp28Q5I043 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.91□□□□□ -2.1
Usp28Q5I043 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm22620-201ENSMUST00000082700 133 ntBASIC1.91□□□□□ -2.1
Usp28Q5I043 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.91□□□□□ -2.1
Usp28Q5I043 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.9□□□□□ -2.1
Usp28Q5I043 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm15526-201ENSMUST00000112504 204 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm14355-201ENSMUST00000117352 264 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm6444-201ENSMUST00000119611 458 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm11363-201ENSMUST00000121672 548 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm23586-201ENSMUST00000157657 123 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm23641-201ENSMUST00000157857 101 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm24846-201ENSMUST00000158033 108 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm24211-201ENSMUST00000158264 107 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm24358-201ENSMUST00000158424 288 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm25314-201ENSMUST00000178810 79 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Usp28Q5I043 Mir6917-201ENSMUST00000184111 61 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm27624-201ENSMUST00000185047 177 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm37361-201ENSMUST00000194345 132 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm44726-201ENSMUST00000203427 217 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.9□□□□□ -2.11
Usp28Q5I043 AC116465.1-201ENSMUST00000220324 235 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC1.9□□□□□ -2.11
Usp28Q5I043 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 AC164297.5-201ENSMUST00000224365 198 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 Gm23040-201ENSMUST00000083869 163 ntBASIC1.9□□□□□ -2.11
Usp28Q5I043 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Usp28Q5I043 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Usp28Q5I043 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Usp28Q5I043 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm13378-201ENSMUST00000117483 336 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm14530-201ENSMUST00000122391 333 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm24596-201ENSMUST00000122504 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm24584-201ENSMUST00000157972 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm22386-201ENSMUST00000158192 129 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm25211-201ENSMUST00000177553 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm24540-201ENSMUST00000177627 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm25256-201ENSMUST00000177746 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm22822-201ENSMUST00000177941 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Rnu6-201ENSMUST00000178023 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm26430-201ENSMUST00000178054 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm23151-201ENSMUST00000178061 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm25245-201ENSMUST00000178139 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm24753-201ENSMUST00000178183 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm25829-201ENSMUST00000178275 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm22092-201ENSMUST00000178290 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm24486-201ENSMUST00000178420 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm23217-201ENSMUST00000178482 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm26245-201ENSMUST00000178491 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm23610-201ENSMUST00000178659 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm23092-201ENSMUST00000178688 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm25709-201ENSMUST00000178844 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm25547-201ENSMUST00000178877 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm25312-201ENSMUST00000178972 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm24722-201ENSMUST00000179017 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm22969-201ENSMUST00000179018 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm25101-201ENSMUST00000179057 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm26378-201ENSMUST00000179093 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm24873-201ENSMUST00000179101 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm23934-201ENSMUST00000179111 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm22623-201ENSMUST00000179244 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm25737-201ENSMUST00000179274 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm22618-201ENSMUST00000179376 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm24182-201ENSMUST00000179419 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm24242-201ENSMUST00000179440 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm24863-201ENSMUST00000179499 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm25064-201ENSMUST00000179535 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm26295-201ENSMUST00000179690 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm23712-201ENSMUST00000179713 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm22823-201ENSMUST00000179754 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm22360-201ENSMUST00000179775 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm24978-201ENSMUST00000179782 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm24967-201ENSMUST00000179791 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm25173-201ENSMUST00000179794 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm24870-201ENSMUST00000179897 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm22288-201ENSMUST00000179904 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm22645-201ENSMUST00000180010 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm24565-201ENSMUST00000180099 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm23805-201ENSMUST00000180129 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm23512-201ENSMUST00000180237 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm25327-201ENSMUST00000180263 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm26058-201ENSMUST00000180294 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm22418-201ENSMUST00000180326 107 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Usp28Q5I043 Gm27317-201ENSMUST00000183533 95 ntBASIC1.89□□□□□ -2.11
Usp28Q5I043 Mir6351-201ENSMUST00000183826 99 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms