Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Trim40Q3UWA4 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Gm24670-201ENSMUST00000104154 132 ntBASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Gm42606-201ENSMUST00000114209 239 ntBASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Gm22488-201ENSMUST00000116811 127 ntBASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Gm24481-201ENSMUST00000157210 102 ntBASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Gm26102-201ENSMUST00000157251 284 ntBASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Gm23324-201ENSMUST00000157421 131 ntBASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Gm24084-201ENSMUST00000175173 137 ntBASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Gm28090-201ENSMUST00000189458 664 ntBASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Gm7837-201ENSMUST00000190873 412 ntBASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Gm43624-201ENSMUST00000197368 180 ntBASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Gm44459-201ENSMUST00000203926 160 ntBASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.17□□□□□ -2.06
Trim40Q3UWA4 AC154296.2-201ENSMUST00000214696 545 ntBASIC2.17□□□□□ -2.06
Trim40Q3UWA4 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Gm10264-201ENSMUST00000220589 429 ntBASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Gm7065-201ENSMUST00000222150 474 ntBASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Gm26457-201ENSMUST00000082678 78 ntBASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Mir128-1-201ENSMUST00000083586 70 ntBASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.17□□□□□ -2.06
Trim40Q3UWA4 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.17□□□□□ -2.06
Trim40Q3UWA4 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Mir682-201ENSMUST00000102281 96 ntBASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm24172-201ENSMUST00000104127 117 ntBASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm15211-201ENSMUST00000118932 528 ntBASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC2.16□□□□□ -2.06
Trim40Q3UWA4 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm23435-201ENSMUST00000157183 156 ntBASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm24769-201ENSMUST00000158506 129 ntBASIC2.16□□□□□ -2.06
Trim40Q3UWA4 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm3027-201ENSMUST00000167579 451 ntBASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Mir7013-201ENSMUST00000183540 72 ntBASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm27505-201ENSMUST00000185071 110 ntBASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm28627-201ENSMUST00000186141 453 ntBASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm37399-201ENSMUST00000195224 416 ntBASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm44844-201ENSMUST00000207242 336 ntBASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm45315-201ENSMUST00000209283 333 ntBASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm45452-201ENSMUST00000210905 177 ntBASIC2.16□□□□□ -2.06
Trim40Q3UWA4 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.16□□□□□ -2.06
Trim40Q3UWA4 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC2.16□□□□□ -2.06
Trim40Q3UWA4 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm22249-201ENSMUST00000082485 136 ntBASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm24623-201ENSMUST00000082616 194 ntBASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm22622-201ENSMUST00000082870 129 ntBASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.16□□□□□ -2.06
Trim40Q3UWA4 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.15□□□□□ -2.06
Trim40Q3UWA4 Gm37761-201ENSMUST00000194989 2098 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Gm24403-201ENSMUST00000104616 130 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Gm12721-201ENSMUST00000120621 268 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Gm16510-201ENSMUST00000153501 249 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Gm25827-201ENSMUST00000157089 107 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Gm25153-201ENSMUST00000157118 156 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Gm24857-201ENSMUST00000158061 310 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Gm16326-201ENSMUST00000162843 414 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Gm43739-201ENSMUST00000198294 307 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Gm43680-201ENSMUST00000199466 340 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Gm43976-201ENSMUST00000203637 235 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Gm44526-201ENSMUST00000204664 121 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Gm44687-201ENSMUST00000204975 235 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Gm45403-201ENSMUST00000209453 276 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Gm45375-201ENSMUST00000210338 280 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.15□□□□□ -2.07
Trim40Q3UWA4 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Trim40Q3UWA4 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Gm36989-201ENSMUST00000193225 2160 ntBASIC2.15□□□□□ -2.07
Trim40Q3UWA4 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Trim40Q3UWA4 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.14□□□□□ -2.07
Trim40Q3UWA4 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC2.14□□□□□ -2.07
Trim40Q3UWA4 Gm25961-201ENSMUST00000157174 135 ntBASIC2.14□□□□□ -2.07
Trim40Q3UWA4 Gm25054-201ENSMUST00000157370 97 ntBASIC2.14□□□□□ -2.07
Trim40Q3UWA4 Gm24192-201ENSMUST00000157978 145 ntBASIC2.14□□□□□ -2.07
Trim40Q3UWA4 Gm25373-201ENSMUST00000158156 115 ntBASIC2.14□□□□□ -2.07
Trim40Q3UWA4 Gm24499-201ENSMUST00000158446 104 ntBASIC2.14□□□□□ -2.07
Trim40Q3UWA4 Gm25486-201ENSMUST00000158726 63 ntBASIC2.14□□□□□ -2.07
Trim40Q3UWA4 Gm22527-201ENSMUST00000158816 106 ntBASIC2.14□□□□□ -2.07
Trim40Q3UWA4 Gm20656-201ENSMUST00000176925 518 ntBASIC2.14□□□□□ -2.07
Trim40Q3UWA4 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.14□□□□□ -2.07
Trim40Q3UWA4 Mir7578-201ENSMUST00000183455 82 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms