Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm25077-201ENSMUST00000179157 79 ntBASIC1.89□□□□□ -2.11
Upf3aQ3ULJ3 Gm5900-201ENSMUST00000179862 375 ntBASIC1.89□□□□□ -2.11
Upf3aQ3ULJ3 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC1.89□□□□□ -2.11
Upf3aQ3ULJ3 Gm38261-201ENSMUST00000192608 316 ntBASIC1.89□□□□□ -2.11
Upf3aQ3ULJ3 Gm37658-201ENSMUST00000192672 315 ntBASIC1.89□□□□□ -2.11
Upf3aQ3ULJ3 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Upf3aQ3ULJ3 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.89□□□□□ -2.11
Upf3aQ3ULJ3 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Upf3aQ3ULJ3 Gm44910-201ENSMUST00000208451 396 ntBASIC1.89□□□□□ -2.11
Upf3aQ3ULJ3 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.89□□□□□ -2.11
Upf3aQ3ULJ3 Gm9318-201ENSMUST00000222444 438 ntBASIC1.89□□□□□ -2.11
Upf3aQ3ULJ3 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.89□□□□□ -2.11
Upf3aQ3ULJ3 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.89□□□□□ -2.11
Upf3aQ3ULJ3 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
Upf3aQ3ULJ3 Gm23517-201ENSMUST00000082830 192 ntBASIC1.89□□□□□ -2.11
Upf3aQ3ULJ3 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.89□□□□□ -2.11
Upf3aQ3ULJ3 Zfp273-201ENSMUST00000012725 2277 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Upf3aQ3ULJ3 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.89□□□□□ -2.11
Upf3aQ3ULJ3 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Upf3aQ3ULJ3 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.88□□□□□ -2.11
Upf3aQ3ULJ3 Gm11935-201ENSMUST00000118608 399 ntBASIC1.88□□□□□ -2.11
Upf3aQ3ULJ3 Gm24997-201ENSMUST00000157910 105 ntBASIC1.88□□□□□ -2.11
Upf3aQ3ULJ3 Gm23196-201ENSMUST00000158806 107 ntBASIC1.88□□□□□ -2.11
Upf3aQ3ULJ3 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Upf3aQ3ULJ3 Mir6370-201ENSMUST00000183510 120 ntBASIC1.88□□□□□ -2.11
Upf3aQ3ULJ3 Gm19441-201ENSMUST00000221545 330 ntBASIC1.88□□□□□ -2.11
Upf3aQ3ULJ3 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Upf3aQ3ULJ3 Gm25853-201ENSMUST00000082793 132 ntBASIC1.88□□□□□ -2.11
Upf3aQ3ULJ3 Gm23097-201ENSMUST00000083448 105 ntBASIC1.88□□□□□ -2.11
Upf3aQ3ULJ3 Mir10a-201ENSMUST00000083585 110 ntBASIC1.88□□□□□ -2.11
Upf3aQ3ULJ3 Mir148b-201ENSMUST00000083626 97 ntBASIC1.88□□□□□ -2.11
Upf3aQ3ULJ3 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
Upf3aQ3ULJ3 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
Upf3aQ3ULJ3 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC1.88□□□□□ -2.11
Upf3aQ3ULJ3 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC1.88□□□□□ -2.11
Upf3aQ3ULJ3 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Gm7164-201ENSMUST00000117503 450 ntBASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Gm12646-201ENSMUST00000119144 238 ntBASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Gm13903-201ENSMUST00000120945 193 ntBASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Gm23713-201ENSMUST00000157353 70 ntBASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Gm22316-201ENSMUST00000158012 216 ntBASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Gm24846-201ENSMUST00000158033 108 ntBASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Gm25335-201ENSMUST00000158043 103 ntBASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Gm22615-201ENSMUST00000158102 70 ntBASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Gm20689-201ENSMUST00000176033 279 ntBASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Gm6660-201ENSMUST00000179149 468 ntBASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Gm44794-201ENSMUST00000206550 411 ntBASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Gm44938-201ENSMUST00000208614 427 ntBASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 AC167229.1-201ENSMUST00000220057 469 ntBASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Upf3aQ3ULJ3 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 Gm24907-201ENSMUST00000116932 128 ntBASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 Gm15215-201ENSMUST00000117773 489 ntBASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 Mir1942-201ENSMUST00000157274 63 ntBASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 Gm24783-201ENSMUST00000157639 100 ntBASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 Gm22555-201ENSMUST00000157801 62 ntBASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 Gm21885-201ENSMUST00000178891 327 ntBASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 Gm3724-201ENSMUST00000197957 349 ntBASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 Gm44024-201ENSMUST00000203008 476 ntBASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 AC162387.1-201ENSMUST00000213369 213 ntBASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 Gm29809-201ENSMUST00000218423 493 ntBASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 AC124346.1-201ENSMUST00000218539 364 ntBASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 AC153526.1-201ENSMUST00000219750 190 ntBASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 CT485612.4-201ENSMUST00000223405 250 ntBASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 AC129208.2-201ENSMUST00000228506 320 ntBASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 Gm23040-201ENSMUST00000083869 163 ntBASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Upf3aQ3ULJ3 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm15714-201ENSMUST00000117168 250 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm12550-201ENSMUST00000118478 329 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm25279-201ENSMUST00000122608 133 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm23725-201ENSMUST00000177876 107 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm26652-202ENSMUST00000181672 475 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm27313-201ENSMUST00000183500 142 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm28838-201ENSMUST00000186338 315 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm29635-201ENSMUST00000187221 315 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm29026-201ENSMUST00000187787 315 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm28797-201ENSMUST00000188543 315 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm28855-201ENSMUST00000188680 315 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm28705-201ENSMUST00000189548 315 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm28939-201ENSMUST00000190351 315 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm28223-201ENSMUST00000190469 315 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm29092-201ENSMUST00000190768 315 ntBASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.85□□□□□ -2.11
Upf3aQ3ULJ3 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms