Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.16□□□□□ -1.74
Limch1Q3UH68 Gm22957-201ENSMUST00000122511 123 ntBASIC4.16□□□□□ -1.74
Limch1Q3UH68 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC4.16□□□□□ -1.74
Limch1Q3UH68 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
Limch1Q3UH68 Mir669k-201ENSMUST00000177742 127 ntBASIC4.16□□□□□ -1.74
Limch1Q3UH68 Mir466b-1-201ENSMUST00000177988 82 ntBASIC4.16□□□□□ -1.74
Limch1Q3UH68 Gm25673-201ENSMUST00000179957 127 ntBASIC4.16□□□□□ -1.74
Limch1Q3UH68 Mir7578-201ENSMUST00000183455 82 ntBASIC4.16□□□□□ -1.74
Limch1Q3UH68 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.16□□□□□ -1.74
Limch1Q3UH68 Gm37575-201ENSMUST00000195467 309 ntBASIC4.16□□□□□ -1.74
Limch1Q3UH68 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.16□□□□□ -1.74
Limch1Q3UH68 Gm21007-201ENSMUST00000221024 326 ntBASIC4.16□□□□□ -1.74
Limch1Q3UH68 Gm25930-201ENSMUST00000082785 107 ntBASIC4.16□□□□□ -1.74
Limch1Q3UH68 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Limch1Q3UH68 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Limch1Q3UH68 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
Limch1Q3UH68 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Limch1Q3UH68 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
Limch1Q3UH68 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.15□□□□□ -1.74
Limch1Q3UH68 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Limch1Q3UH68 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.15□□□□□ -1.74
Limch1Q3UH68 Gm26696-201ENSMUST00000181941 2848 ntBASIC4.15□□□□□ -1.74
Limch1Q3UH68 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
Limch1Q3UH68 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4.15□□□□□ -1.75
Limch1Q3UH68 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC4.15□□□□□ -1.75
Limch1Q3UH68 Gm24605-201ENSMUST00000104772 96 ntBASIC4.15□□□□□ -1.75
Limch1Q3UH68 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4.15□□□□□ -1.75
Limch1Q3UH68 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.15□□□□□ -1.75
Limch1Q3UH68 Gm25438-201ENSMUST00000158281 110 ntBASIC4.15□□□□□ -1.75
Limch1Q3UH68 Gm21827-201ENSMUST00000178247 423 ntBASIC4.15□□□□□ -1.75
Limch1Q3UH68 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Limch1Q3UH68 Gm42774-201ENSMUST00000198854 283 ntBASIC4.15□□□□□ -1.75
Limch1Q3UH68 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Limch1Q3UH68 Gm44520-201ENSMUST00000205447 802 ntBASIC4.15□□□□□ -1.75
Limch1Q3UH68 AC192091.2-201ENSMUST00000217869 117 ntBASIC4.15□□□□□ -1.75
Limch1Q3UH68 Snord14d-201ENSMUST00000083424 86 ntBASIC4.15□□□□□ -1.75
Limch1Q3UH68 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Limch1Q3UH68 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Limch1Q3UH68 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Limch1Q3UH68 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Limch1Q3UH68 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Limch1Q3UH68 Mir1b-201ENSMUST00000117012 122 ntBASIC4.14□□□□□ -1.75
Limch1Q3UH68 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC4.14□□□□□ -1.75
Limch1Q3UH68 Gm12550-201ENSMUST00000118478 329 ntBASIC4.14□□□□□ -1.75
Limch1Q3UH68 Gm12934-201ENSMUST00000119221 343 ntBASIC4.14□□□□□ -1.75
Limch1Q3UH68 Gm12304-201ENSMUST00000120312 385 ntBASIC4.14□□□□□ -1.75
Limch1Q3UH68 Gm25535-201ENSMUST00000175364 125 ntBASIC4.14□□□□□ -1.75
Limch1Q3UH68 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Limch1Q3UH68 Gm27470-201ENSMUST00000184070 210 ntBASIC4.14□□□□□ -1.75
Limch1Q3UH68 Gm19901-201ENSMUST00000192191 495 ntBASIC4.14□□□□□ -1.75
Limch1Q3UH68 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Limch1Q3UH68 Gm5175-202ENSMUST00000219699 529 ntBASIC4.14□□□□□ -1.75
Limch1Q3UH68 AC118006.1-201ENSMUST00000224211 501 ntBASIC4.14□□□□□ -1.75
Limch1Q3UH68 AC098718.2-201ENSMUST00000226822 285 ntBASIC4.14□□□□□ -1.75
Limch1Q3UH68 Gm23462-201ENSMUST00000083264 104 ntBASIC4.14□□□□□ -1.75
Limch1Q3UH68 Gm43883-201ENSMUST00000204002 3750 ntBASIC4.13□□□□□ -1.75
Limch1Q3UH68 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
Limch1Q3UH68 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC4.13□□□□□ -1.75
Limch1Q3UH68 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC4.13□□□□□ -1.75
Limch1Q3UH68 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Limch1Q3UH68 Mir673-201ENSMUST00000102361 91 ntBASIC4.13□□□□□ -1.75
Limch1Q3UH68 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC4.13□□□□□ -1.75
Limch1Q3UH68 Gm23013-201ENSMUST00000104146 106 ntBASIC4.13□□□□□ -1.75
Limch1Q3UH68 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC4.13□□□□□ -1.75
Limch1Q3UH68 Gm22036-201ENSMUST00000157279 215 ntBASIC4.13□□□□□ -1.75
Limch1Q3UH68 Gm23391-201ENSMUST00000157579 104 ntBASIC4.13□□□□□ -1.75
Limch1Q3UH68 Gm22316-201ENSMUST00000158012 216 ntBASIC4.13□□□□□ -1.75
Limch1Q3UH68 Gm26141-201ENSMUST00000175299 126 ntBASIC4.13□□□□□ -1.75
Limch1Q3UH68 Gm28650-201ENSMUST00000188413 411 ntBASIC4.13□□□□□ -1.75
Limch1Q3UH68 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC4.13□□□□□ -1.75
Limch1Q3UH68 Gm23370-202ENSMUST00000197008 129 ntBASIC4.13□□□□□ -1.75
Limch1Q3UH68 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC4.13□□□□□ -1.75
Limch1Q3UH68 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC4.13□□□□□ -1.75
Limch1Q3UH68 Snord80-202ENSMUST00000199023 77 ntBASIC4.13□□□□□ -1.75
Limch1Q3UH68 Gm43680-201ENSMUST00000199466 340 ntBASIC4.13□□□□□ -1.75
Limch1Q3UH68 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC4.13□□□□□ -1.75
Limch1Q3UH68 Gm9174-201ENSMUST00000078149 255 ntBASIC4.13□□□□□ -1.75
Limch1Q3UH68 Gm10161-201ENSMUST00000091506 204 ntBASIC4.13□□□□□ -1.75
Limch1Q3UH68 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
Limch1Q3UH68 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
Limch1Q3UH68 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Limch1Q3UH68 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
Limch1Q3UH68 Gm8473-201ENSMUST00000176697 1885 ntBASIC4.12□□□□□ -1.75
Limch1Q3UH68 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
Limch1Q3UH68 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC4.12□□□□□ -1.75
Limch1Q3UH68 Gm25321-201ENSMUST00000122558 102 ntBASIC4.12□□□□□ -1.75
Limch1Q3UH68 Gm25066-201ENSMUST00000158145 123 ntBASIC4.12□□□□□ -1.75
Limch1Q3UH68 Gm25860-201ENSMUST00000158252 126 ntBASIC4.12□□□□□ -1.75
Limch1Q3UH68 Gm24930-201ENSMUST00000158315 83 ntBASIC4.12□□□□□ -1.75
Limch1Q3UH68 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC4.12□□□□□ -1.75
Limch1Q3UH68 Gm28591-201ENSMUST00000185259 183 ntBASIC4.12□□□□□ -1.75
Limch1Q3UH68 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC4.12□□□□□ -1.75
Limch1Q3UH68 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
Limch1Q3UH68 Gm43746-201ENSMUST00000200028 317 ntBASIC4.12□□□□□ -1.75
Limch1Q3UH68 Gm2189-201ENSMUST00000201419 429 ntBASIC4.12□□□□□ -1.75
Limch1Q3UH68 Gm44563-201ENSMUST00000207958 178 ntBASIC4.12□□□□□ -1.75
Limch1Q3UH68 AC164100.1-201ENSMUST00000227214 508 ntBASIC4.12□□□□□ -1.75
Limch1Q3UH68 Gm25813-201ENSMUST00000082748 191 ntBASIC4.12□□□□□ -1.75
Limch1Q3UH68 n-R5s220-201ENSMUST00000082926 120 ntBASIC4.12□□□□□ -1.75
Limch1Q3UH68 Mir384-201ENSMUST00000083565 88 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 160.9 ms