Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm24018-201ENSMUST00000083232 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm25794-201ENSMUST00000083286 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm25790-201ENSMUST00000083293 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm22295-201ENSMUST00000083311 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm25127-201ENSMUST00000083336 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm23247-201ENSMUST00000083373 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm25583-201ENSMUST00000083413 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm25577-201ENSMUST00000083414 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm24414-201ENSMUST00000083434 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm24861-201ENSMUST00000083459 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm24803-201ENSMUST00000083693 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm23103-201ENSMUST00000083725 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm22580-201ENSMUST00000083727 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm24260-201ENSMUST00000083741 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm23732-201ENSMUST00000083751 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm22682-201ENSMUST00000083854 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm25869-201ENSMUST00000083855 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm24693-201ENSMUST00000083885 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm26317-201ENSMUST00000083894 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm22352-201ENSMUST00000083917 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm24448-201ENSMUST00000083979 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm22798-201ENSMUST00000083992 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm26427-201ENSMUST00000093648 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm22886-201ENSMUST00000093714 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Gm22170-201ENSMUST00000097247 107 ntBASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Vmn1r19-201ENSMUST00000089830 2255 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Trafd1Q3UDK1 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Gm15896-201ENSMUST00000118045 440 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Gm22791-201ENSMUST00000157232 145 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Gm24716-201ENSMUST00000157524 104 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Gm25460-201ENSMUST00000157954 127 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Gm24857-201ENSMUST00000158061 310 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Gm27013-201ENSMUST00000182441 1024 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Mir7226-201ENSMUST00000184953 60 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Gm20058-201ENSMUST00000186939 284 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Gm44825-201ENSMUST00000207557 150 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Gm44598-201ENSMUST00000207566 150 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Gm18000-201ENSMUST00000212153 800 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 AC164567.2-201ENSMUST00000219363 445 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 AC130222.1-201ENSMUST00000221198 256 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 AC126554.1-201ENSMUST00000222161 271 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Gm18617-201ENSMUST00000222311 259 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Gm22978-201ENSMUST00000082607 160 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Gm22364-201ENSMUST00000083097 98 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Gm5596-201ENSMUST00000207988 2421 ntBASIC2.11□□□□□ -2.07
Trafd1Q3UDK1 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 Gm13903-201ENSMUST00000120945 193 ntBASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 Gm26256-201ENSMUST00000122499 186 ntBASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 Gm2830-201ENSMUST00000140330 385 ntBASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 Gm23641-201ENSMUST00000157857 101 ntBASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 Gm23548-201ENSMUST00000158963 106 ntBASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 Gm18356-201ENSMUST00000185677 623 ntBASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 AC154296.1-201ENSMUST00000198150 67 ntBASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 Gm43976-201ENSMUST00000203637 235 ntBASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 Gm43884-201ENSMUST00000204251 559 ntBASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 Gm44687-201ENSMUST00000204975 235 ntBASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 AC153864.2-201ENSMUST00000220424 292 ntBASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 AC117202.2-201ENSMUST00000226491 1101 ntBASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 AC164304.1-201ENSMUST00000226920 272 ntBASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 Gm25801-201ENSMUST00000082638 106 ntBASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 Gm23242-201ENSMUST00000083055 107 ntBASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 Gm24043-201ENSMUST00000083108 116 ntBASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 Mir322-201ENSMUST00000083484 95 ntBASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Trafd1Q3UDK1 AC122887.2-201ENSMUST00000219465 1603 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm7164-201ENSMUST00000117503 450 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm15183-201ENSMUST00000118933 348 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm14551-201ENSMUST00000120802 256 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm11363-201ENSMUST00000121672 548 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm23169-201ENSMUST00000157157 112 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm26149-201ENSMUST00000157432 108 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm25909-201ENSMUST00000157619 121 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm24237-201ENSMUST00000157790 132 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm24853-201ENSMUST00000158026 121 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm22891-201ENSMUST00000158641 164 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm21737-201ENSMUST00000178112 664 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm21815-201ENSMUST00000178213 664 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm20874-201ENSMUST00000178356 663 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Gm20901-201ENSMUST00000180177 664 ntBASIC2.09□□□□□ -2.07
Trafd1Q3UDK1 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms