Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Gm18429-201ENSMUST00000198707 421 ntBASIC4.47□□□□□ -1.69
Rnf40Q3U319 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.47□□□□□ -1.69
Rnf40Q3U319 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Rnf40Q3U319 AC141895.1-201ENSMUST00000218141 273 ntBASIC4.47□□□□□ -1.69
Rnf40Q3U319 Mir201-201ENSMUST00000083470 66 ntBASIC4.47□□□□□ -1.69
Rnf40Q3U319 Olfr112-205ENSMUST00000213274 3558 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Rnf40Q3U319 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
Rnf40Q3U319 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Rnf40Q3U319 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.47□□□□□ -1.69
Rnf40Q3U319 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC4.47□□□□□ -1.69
Rnf40Q3U319 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.69
Rnf40Q3U319 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Rnf40Q3U319 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.46□□□□□ -1.7
Rnf40Q3U319 Gm14473-201ENSMUST00000122269 557 ntBASIC4.46□□□□□ -1.7
Rnf40Q3U319 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.46□□□□□ -1.7
Rnf40Q3U319 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Rnf40Q3U319 Gm22192-201ENSMUST00000175128 85 ntBASIC4.46□□□□□ -1.7
Rnf40Q3U319 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Rnf40Q3U319 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Rnf40Q3U319 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Rnf40Q3U319 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.46□□□□□ -1.7
Rnf40Q3U319 Gm37918-201ENSMUST00000192071 120 ntBASIC4.46□□□□□ -1.7
Rnf40Q3U319 Gm42719-201ENSMUST00000197393 355 ntBASIC4.46□□□□□ -1.7
Rnf40Q3U319 AC159188.1-201ENSMUST00000225198 526 ntBASIC4.46□□□□□ -1.7
Rnf40Q3U319 Snord15b-201ENSMUST00000083032 145 ntBASIC4.46□□□□□ -1.7
Rnf40Q3U319 Gm25632-201ENSMUST00000083112 85 ntBASIC4.46□□□□□ -1.7
Rnf40Q3U319 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Rnf40Q3U319 Gm44177-201ENSMUST00000204338 2667 ntBASIC4.46□□□□□ -1.7
Rnf40Q3U319 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Rnf40Q3U319 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Rnf40Q3U319 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.45□□□□□ -1.7
Rnf40Q3U319 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Rnf40Q3U319 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Rnf40Q3U319 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Rnf40Q3U319 Gm12013-201ENSMUST00000121971 155 ntBASIC4.45□□□□□ -1.7
Rnf40Q3U319 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Rnf40Q3U319 Gm23718-201ENSMUST00000157350 307 ntBASIC4.45□□□□□ -1.7
Rnf40Q3U319 Gm24056-201ENSMUST00000158617 146 ntBASIC4.45□□□□□ -1.7
Rnf40Q3U319 Mir7012-201ENSMUST00000183900 64 ntBASIC4.45□□□□□ -1.7
Rnf40Q3U319 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC4.45□□□□□ -1.7
Rnf40Q3U319 Gm45162-201ENSMUST00000209013 618 ntBASIC4.45□□□□□ -1.7
Rnf40Q3U319 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Rnf40Q3U319 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Rnf40Q3U319 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.45□□□□□ -1.7
Rnf40Q3U319 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Rnf40Q3U319 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Rnf40Q3U319 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Rnf40Q3U319 Gm15303-201ENSMUST00000118676 2624 ntBASIC4.44□□□□□ -1.7
Rnf40Q3U319 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Rnf40Q3U319 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Rnf40Q3U319 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Rnf40Q3U319 Gm42547-201ENSMUST00000201159 3798 ntBASIC4.44□□□□□ -1.7
Rnf40Q3U319 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Rnf40Q3U319 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Rnf40Q3U319 Gm22272-201ENSMUST00000104039 134 ntBASIC4.44□□□□□ -1.7
Rnf40Q3U319 Gm14602-201ENSMUST00000118625 340 ntBASIC4.44□□□□□ -1.7
Rnf40Q3U319 Gm6079-201ENSMUST00000121356 404 ntBASIC4.44□□□□□ -1.7
Rnf40Q3U319 Gm15214-201ENSMUST00000122155 470 ntBASIC4.44□□□□□ -1.7
Rnf40Q3U319 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Rnf40Q3U319 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC4.44□□□□□ -1.7
Rnf40Q3U319 Mir1936-201ENSMUST00000158699 93 ntBASIC4.44□□□□□ -1.7
Rnf40Q3U319 Gm20674-201ENSMUST00000177452 369 ntBASIC4.44□□□□□ -1.7
Rnf40Q3U319 Gm38364-201ENSMUST00000191814 179 ntBASIC4.44□□□□□ -1.7
Rnf40Q3U319 Gm45791-201ENSMUST00000212908 352 ntBASIC4.44□□□□□ -1.7
Rnf40Q3U319 CT009696.1-201ENSMUST00000215745 256 ntBASIC4.44□□□□□ -1.7
Rnf40Q3U319 Gm23727-201ENSMUST00000083352 164 ntBASIC4.44□□□□□ -1.7
Rnf40Q3U319 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.44□□□□□ -1.7
Rnf40Q3U319 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Rnf40Q3U319 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Rnf40Q3U319 Elavl4-202ENSMUST00000102723 4024 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Rnf40Q3U319 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Rnf40Q3U319 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.43□□□□□ -1.7
Rnf40Q3U319 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Rnf40Q3U319 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Rnf40Q3U319 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Rnf40Q3U319 Gm24855-201ENSMUST00000104848 97 ntBASIC4.43□□□□□ -1.7
Rnf40Q3U319 Gm13687-201ENSMUST00000119857 282 ntBASIC4.43□□□□□ -1.7
Rnf40Q3U319 Gm23183-201ENSMUST00000122595 323 ntBASIC4.43□□□□□ -1.7
Rnf40Q3U319 Gm25293-201ENSMUST00000122792 285 ntBASIC4.43□□□□□ -1.7
Rnf40Q3U319 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC4.43□□□□□ -1.7
Rnf40Q3U319 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.43□□□□□ -1.7
Rnf40Q3U319 Gm26098-201ENSMUST00000157247 288 ntBASIC4.43□□□□□ -1.7
Rnf40Q3U319 Gm23599-201ENSMUST00000157261 251 ntBASIC4.43□□□□□ -1.7
Rnf40Q3U319 Gm26187-201ENSMUST00000157693 101 ntBASIC4.43□□□□□ -1.7
Rnf40Q3U319 Gm24751-201ENSMUST00000157844 102 ntBASIC4.43□□□□□ -1.7
Rnf40Q3U319 Gm22946-201ENSMUST00000158558 82 ntBASIC4.43□□□□□ -1.7
Rnf40Q3U319 Gm23053-201ENSMUST00000175136 96 ntBASIC4.43□□□□□ -1.7
Rnf40Q3U319 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC4.43□□□□□ -1.7
Rnf40Q3U319 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.43□□□□□ -1.7
Rnf40Q3U319 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.43□□□□□ -1.7
Rnf40Q3U319 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC4.43□□□□□ -1.7
Rnf40Q3U319 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.43□□□□□ -1.7
Rnf40Q3U319 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Rnf40Q3U319 mt-Tv-201ENSMUST00000082389 69 ntBASIC4.43□□□□□ -1.7
Rnf40Q3U319 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC4.43□□□□□ -1.7
Rnf40Q3U319 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Rnf40Q3U319 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Rnf40Q3U319 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Rnf40Q3U319 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.43□□□□□ -1.7
Rnf40Q3U319 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 117.4 ms